Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0161 ATGTTGTCAACACTCCTATTTCTTCTATGCCTTACTCTTCCTATACTTGTATTTTTCTTCATTCACAATCACAAAAACAATAAGAACCCACCTAGTCCACCTGGTCCTAGAGGACTTCCCATAATTGGAAATCTTCTTCAACTAGACAATACTAAACTTCATCTTCAACTATGGAACCTCTCAAAGAAATATGGTCCTATATTTTCGCTTCAACTCGGTTCAAGGCCAGCCCTTGTAATTTCCTCACCAAAACTAGCCAAAGAGGTTTTGAAAAACCATGGCCTAGTTTTTTCTGGAAGGCCTTCTTTCCTTGGCCAACAGAAATTGTCCTATAAAGGGTTAGAGATATTTTTTTCACCATATAGTGATTATTGGAGAGAAATAAGAAAAATTTGTGTTGTTCATATCTTTAACTCCAAGCGTGTAACAAGTTTTTCATCTATAAGACAATATGAGGTTAAGCAAATGATAAAAACAATATCTAGGCATGCTTCTTCTTCAAAAGTCACAAACTTGAGTGAGTTAATGATTTCTCTTTCAAGCACTATAATTTGTAGGGTTGCTCTTGGGAGAAGGTATGAAGATGAAGGAACAGAAAAGAGTAGGTTCCATGGGCTATTCAATGAGTTTCAAGCAATGATGACAGCTTTTTTTGTATCAGATTATATACCCTTCATGGGTTGGATTGATAAACTTACAGGGTTGCATACACGTTTAGATCGAATTTTCAAGGAGATGGATAAGTTCTACCAAGAAGTCATTGATGAACGTGTTGATCAGAATAAGCAATATAGAGAGGAAGAGGGAGAGGTTATAGTTGATGTCTTACTTCATCTGAAGAAGCAGCGTTTGTTTTCGGTTGATCTCACTTATGATCATATCAAAGCAGTGCTCATGGATATTATTGTAGCATCAACAGATACCACTGCAGCCACAATAGTATGGGCCATGACAGCACTAATAAAAAACCCAAGAGTAATGAACAAAGTACAAGAAGAAATTAGAAAGTTTGAAGGTGAGAAAGATTTTATAGATGAAGATGATATTCAAAAGTTTCCTTATTTCAAGGCAGTGATGAAAGAGACATTGAGATTGCACCTACCAGCCCCACTACTTGTTCCAAGAGAAGCAAATGAAAATTGCATTATAAATGGCTACCAAATTAAAGCCAAGACAATAGTTTATGTGAATGCTTGGGCTATTCATAGGGATCCTGAGGCTTGGAAAGACCCACAAGAGTTTTATCCTGAAAGATTCTTAGACAGTGCTATAGATTTTCAAGGACAAGATTTTGAATTAATTCCTTTCGGAGCAGGTCGTAGAGTTTGTCCGGGTTTGCCCATGGCAATTCCGGCATTAGATCTTATTCTTGCTAATCTCCTTTATTCCTTTAATTGGGAATTACCACCTGGAATTGTAAAGGAAGATATCGATTTGGAAGTATCGCCTGGACTTACTCAACACAAGAAGATTCCTCTTTGCCTTTATGCCAAGAACTATATGAGTGTATAA 1512 0.3677 MLSTLLFLLCLTLPILVFFFIHNHKNNKNPPSPPGPRGLPIIGNLLQLDNTKLHLQLWNLSKKYGPIFSLQLGSRPALVISSPKLAKEVLKNHGLVFSGRPSFLGQQKLSYKGLEIFFSPYSDYWREIRKICVVHIFNSKRVTSFSSIRQYEVKQMIKTISRHASSSKVTNLSELMISLSSTIICRVALGRRYEDEGTEKSRFHGLFNEFQAMMTAFFVSDYIPFMGWIDKLTGLHTRLDRIFKEMDKFYQEVIDERVDQNKQYREEEGEVIVDVLLHLKKQRLFSVDLTYDHIKAVLMDIIVASTDTTAATIVWAMTALIKNPRVMNKVQEEIRKFEGEKDFIDEDDIQKFPYFKAVMKETLRLHLPAPLLVPREANENCIINGYQIKAKTIVYVNAWAIHRDPEAWKDPQEFYPERFLDSAIDFQGQDFELIPFGAGRRVCPGLPMAIPALDLILANLLYSFNWELPPGIVKEDIDLEVSPGLTQHKKIPLCLYAKNYMSV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0161 503 Coils Coil 250 270 - -
Lan12g0161 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Lan12g0161 503 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 501 - -
Lan12g0161 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 Coils Coil 327 347 - -
Lan12g0161 503 PANTHER CYTOCHROME P450 71B11-RELATED 5 501 - -
Lan12g0161 503 SUPERFAMILY Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 Gene3D Cytochrome P450 19 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0161 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0161 Lan-Chr12 2135563 2138227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0161 5 495 Cytochrome P450 AT4G31500 45.951 4.07e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0161 - - gmx:100778293 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0161 12 2135563 2138227 Lan1g0736 1 17328878 17331897 LSH