Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0160 ATGTCTGCCTCATCCACTTCCTTTTCACCGGACCAACAACAACAACAACAGCAACTCTCTCCCTCCGACCAACTCTGTTATGTTCATTGCAACTTCTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACTGTGACTGTGAGATGTGGCCATTGCACTAACCTTCTTTCTGTGAACATGCGTGGACTGCTTCTTCCTCCTACTAATCAGCTTCATGTTGGTCACAACTTCTTCACTCCTCAAAATCTTATGGAGGAGATTCGAAATGCACCTTCAACAAATATGATGATGAATCAGATGCCTAACCAAAATGATTTGGTCATGAACACCATGCGAGGAGGACCAGAAGAAATTCCTAAGCCTCCACCACCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCAGCTTACAACCGCTTCATCAAGGATGAGATCCAACGTATAAAAGCTGGAAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCTCATTTCCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATATTCGCCAGGAAGCAGAAGACGTGCTTATGAAAGATGGGTTTTTCTCACCAGCAAATGTAGGTGTTACCCCCTACTAA 663 0.4495 MSASSTSFSPDQQQQQQQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPPTNQLHVGHNFFTPQNLMEEIRNAPSTNMMMNQMPNQNDLVMNTMRGGPEEIPKPPPPNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANIRQEAEDVLMKDGFFSPANVGVTPY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0160 220 MobiDBLite consensus disorder prediction 116 138 - -
Lan12g0160 220 PANTHER PROTEIN YABBY 6-RELATED 1 218 IPR006780 GO:0007275
Lan12g0160 220 PANTHER PROTEIN YABBY 4 1 218 - -
Lan12g0160 220 SUPERFAMILY HMG-box 129 178 IPR036910 -
Lan12g0160 220 Pfam YABBY protein 21 184 IPR006780 GO:0007275
Lan12g0160 220 Gene3D High mobility group box domain 124 201 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0160 Lan-Chr12 2101024 2104554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0160 32 218 C2C2-YABBY Transcription Factor Family AT4G00180 62.857 1.53e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan12g0160 YABBY 3.4e-74 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0160 K25796 - gmx:100794423 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0160 12 2101024 2104554 Lan1g0740 1 17377285 17380818 LSH