Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0157 ATGCAGTTCAAGCTCAACAAGCGTGTAACCCGAGTCACTAGATGGATTTTCACAAGGTTCTTTTCGACCCGACCCGGTTACCGTCGTATGGGTTCTTCTTCTTCTTCTTCTTCTTCAAGGAAACCCATGACGAAGAAGCTTCATTCATTGGGTCGTAAACTAACGATTAGAGCAAGATCTCTCTGTTCTTCTGCGAAGTTCGGGTCAAGATACGAACCAATTGGGTCCGATCCAGTTCAAGATACGGTTCCAAAGGGTCATTTAGCTGTTTACGTTGGTCAGAAAGACGGTGACGGCGATTTTTGCCGTGTTTTGGTTCCGGTGATATATTTCAACCACCCGTTGTTTGGGGAGTTGTTGAAAAAAGCTGAGAAGGTGTATGGGTTTGAACACCAAGGTGGGATCACGATTCCGTGCCGAGTTGCTGAGTTTGAACGAGTCAAGACCCGAATTGAGTCCGGGTTCGGTGTTAACAGTGGCTGCCGGAGATTAGCATTGCCGTGGTTCGGTAAATGA 516 0.4709 MQFKLNKRVTRVTRWIFTRFFSTRPGYRRMGSSSSSSSSRKPMTKKLHSLGRKLTIRARSLCSSAKFGSRYEPIGSDPVQDTVPKGHLAVYVGQKDGDGDFCRVLVPVIYFNHPLFGELLKKAEKVYGFEHQGGITIPCRVAEFERVKTRIESGFGVNSGCRRLALPWFGK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0157 171 PANTHER SMALL AUXIN-UP RNA-RELATED 3 158 - -
Lan12g0157 171 Pfam Auxin responsive protein 47 148 IPR003676 GO:0009733
Lan12g0157 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 158 IPR003676 GO:0009733
Lan12g0157 171 MobiDBLite consensus disorder prediction 27 48 - -
Lan12g0157 171 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0157 Lan-Chr12 1969176 1970526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0157 83 153 Calmodulin-binding Proteins AT3G43120 46.479 6.57e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0157 K14488 - gmx:100808164 174.866