Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0147 ATGGCACAACTCAACCTCACTTTACTAGTCATTTTCCTTTCACTCTTTGTTTCAAGTGTCTTAGTTAACCCATCTTTGGCCAAGCATAATCCAAAAACATTAAGCTATATAGAGTCCTCTTGCAACGGCACCCTCTGCCGAGATCTATGCATTCGTTGTCTAGCTAAATATGTTAAAAACTATTCAACTATAGATGGCCCTCATCACTTAGCTCAAGTTGCCTTATCAGTGAGCCTTTCCAGAGCATTACACACAAGAGGGTATTTGATGAAATTGGCCAAGGAACTCAAGACAATCAAGAACAAAAGGGATTACCTGACCGTAAAAGATTGTGCTAATCAAATAAGTGATAGTGTAGATCAACTCAGCCAAGCCATCAAAGAACTAAGCCGATGTAGCCAACATGGCTCCACCATTAATGATGACATGTTGTGGCATATAAGTAACGTTGAGACATGGGTTAGCACTGCCTTAACAAATGCTAGTAGTTGTGTATATTCTTTTACAGGTGTTAGGATGAGTAAGAGGATGACTGCAATTAAGGTTAAGGCACAAAATGTGGCAGAAGTCACTAGTAATGCATTAGCCTTGTTTCATAGATATGCATTAAGGTTGCAACAAGCAACAGCTAGAACCACCCAGAAGCCCTAA 651 0.3994 MAQLNLTLLVIFLSLFVSSVLVNPSLAKHNPKTLSYIESSCNGTLCRDLCIRCLAKYVKNYSTIDGPHHLAQVALSVSLSRALHTRGYLMKLAKELKTIKNKRDYLTVKDCANQISDSVDQLSQAIKELSRCSQHGSTINDDMLWHISNVETWVSTALTNASSCVYSFTGVRMSKRMTAIKVKAQNVAEVTSNALALFHRYALRLQQATARTTQKP* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0147 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 201 IPR006501 GO:0004857
Lan12g0147 216 Pfam Plant invertase/pectin methylesterase inhibitor 36 197 IPR006501 GO:0004857
Lan12g0147 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 201 IPR035513 -
Lan12g0147 216 PANTHER BNAANNG18590D PROTEIN 2 205 - -
Lan12g0147 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 200 IPR035513 -
Lan12g0147 216 CDD PMEI-like_3 39 202 - -
Lan12g0147 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 205 - -
Lan12g0147 216 SMART PMEI_2 32 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0147 Lan-Chr12 1767720 1768489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0147 6 197 Carbohydrate Esterase AT3G05610 23.762 2.93e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0147 - - gmx:100791798 279.256