Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0146 ATGGCACAACTGAACCTCACTTTACTAGTCATTTTCCTTTCTCTCTTCGTTTCAAGTGTCTTAGTTAAATCATCTTTGGCCAAGCATAATCCCCAAACAATAAGCTATATAGAATCCTCTTGCAATGGCACCCTCTATCAAGATCTATGCATTCGTTGTCTGGCCAAATATGTTAAAAACTATTCAACTATAGATGGCCCTCATCACTTAGCTCAAGTAGCCTTATCAGTGAGTCTTTCCAGAGCATCACATACAAGAGGGTACTTGTTCAAATTGGCAAAGGAACTCAAGACAATCAAGAACAAAAGGGATTACCTGACCGTAAAAGATTGTGCTAATCAAATAAGTGATAGTGTAGATCAACTCAGCCAAGCCATCAAAGAACTAAGCCGATGTAGCCAACATGGCTCCACCATTAATGATGACATGTTGTGGCATATAAGTAACGTTGAGACATGGGTTAGCACTGCCTTAACAAATGCTAGTAGTTGTGTATATTCTTTTACAGGTGTTAGGATGAGTAAGAGGATGACTGCAATTAAGGTTAAGGCACAAAATGTGGCAGAAGTCACTAGTAATGCATTAGCCTTGTTTCATAGATATGCATTAAGGTTGCAACAAGCAACAGCTAGAACCACCCAGAAGCCCTAA 651 0.3948 MAQLNLTLLVIFLSLFVSSVLVKSSLAKHNPQTISYIESSCNGTLYQDLCIRCLAKYVKNYSTIDGPHHLAQVALSVSLSRASHTRGYLFKLAKELKTIKNKRDYLTVKDCANQISDSVDQLSQAIKELSRCSQHGSTINDDMLWHISNVETWVSTALTNASSCVYSFTGVRMSKRMTAIKVKAQNVAEVTSNALALFHRYALRLQQATARTTQKP* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0146 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 201 IPR035513 -
Lan12g0146 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 205 - -
Lan12g0146 216 Pfam Plant invertase/pectin methylesterase inhibitor 36 197 IPR006501 GO:0004857
Lan12g0146 216 SMART PMEI_2 32 197 IPR006501 GO:0004857
Lan12g0146 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 200 IPR035513 -
Lan12g0146 216 PANTHER BNAANNG18590D PROTEIN 2 205 - -
Lan12g0146 216 CDD PMEI-like_3 39 202 - -
Lan12g0146 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0146 Lan-Chr12 1751427 1752206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0146 31 197 Carbohydrate Esterase AT3G14310 25.294 9.44e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0146 - - gmx:100791798 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0146 12 1751427 1752206 Lan1g2019 1 35336834 35337518 LSH