Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0143 ATGGAAGGATTGGATAGCATGATAGATAAGCTTTCAGAAGCAAGGAAGAACAAAGGCAAAAGGATTCAACTTGTAGAGTCTGAAATTCGCAATCTTTGCATCACCGCAAAACAAATCTTCCTCACCCAGCCTAACCTACTCGAATTGGAAGCTCCCATTAACATTTGTGGTGATATACACGGGCAATATCCAGACTTGTTGCGAGTTTTCGAGTATGGTGGTCTTCCTCCAGATTCGAATTACTTATTCCTTGGTGACTATGTCGATAGAGGAAAACAAAGTATAGAAACAATATGTCTCCTCCTTGCTTACAAGATCAAATACCCAACAAACTTCTTTCTTCTAAGAGGCAATCATGAATGTGCATCAATCAATAGAATTTATGGGTTCTATGATGAGTGTAAGAGAAGATTCAACGTCCGATTATGGAAAATATTTACAGATTGTTTCAATTGTTTACCTGTAGCAGCAGTGATTGATGAAAAGATACTATGCATGCATGGAGGGCTTTCTCCGGATATGGAGAGCTTGAATCAGATTAAAGCGATTGAAAGGCCAGTGGATGTGCCAGATCAGGGTCTCTTATGTGACCTACTTTGGTCTGATCCTGACACAGAAGTTAGAGGTTGGGGTGAGAATGATAGAGGTGTTTCATACACTTTTGGACCTGATAAAGTTGCTGAGTTCTTGAACAAACACGACCTTGATCTCATTTGCAGGGCTCACCAGGTTGTTGAAGATGGATATCAATTCTTTGCAGATAGGCAATTAGTTACAATATTTTCAGCGCCAAACTATTGTGGAGAGTTTAATAATGCAGGCGCGTTAATGTGTGTCGATGAAACTTTACTCTGTTCATTTCAGATTCTCAAACCCTTAAGAGCAAAAAATACATAG 897 0.3946 MEGLDSMIDKLSEARKNKGKRIQLVESEIRNLCITAKQIFLTQPNLLELEAPINICGDIHGQYPDLLRVFEYGGLPPDSNYLFLGDYVDRGKQSIETICLLLAYKIKYPTNFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAAVIDEKILCMHGGLSPDMESLNQIKAIERPVDVPDQGLLCDLLWSDPDTEVRGWGENDRGVSYTFGPDKVAEFLNKHDLDLICRAHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDETLLCSFQILKPLRAKNT* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0143 298 CDD MPP_PP1_PPKL 4 292 - -
Lan12g0143 298 Pfam Calcineurin-like phosphoesterase 53 244 IPR004843 GO:0016787
Lan12g0143 298 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
Lan12g0143 298 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Lan12g0143 298 SUPERFAMILY Metallo-dependent phosphatases 19 294 IPR029052 -
Lan12g0143 298 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 4 297 - -
Lan12g0143 298 Gene3D - 2 298 IPR029052 -
Lan12g0143 298 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 297 - -
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Lan12g0143 298 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Lan12g0143 298 SMART pp2a_7 24 294 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0143 Lan-Chr12 1644650 1645978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0143 31 240 Calmodulin-binding Proteins AT5G63870 29.600 6.73e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0143 K06269 - gmx:100804212 567.77