Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0137 ATGAACATCATGCCTTCACTCCTCTCTCCAACTACTGCACTTAAACAACATAACCATATCACAATTTGCTTCTCTCCATTCAAACCAACAACTCCAACATATAATAATAACAACAATGTTTCTTTCAAAGGTTGTAGTAATTCTTCAAAGTGTCATGCTTTTTTTGATGATATATCCAATGGGTTATTAGAGAACAGTGTTATCCAATCAGGAATAATGCAAGTTGAGAGAGTGAGTGAAGACTTATCAGACATGCAGAGATGGAGTTTTCTCATATTTGGTGGATTGACATGGATTTACTTAACTGCAAGGCCAGGTGTTCTTGTTGGTGCAATTGATGCATACCTTCTTGCTCCTCTTCAACTTGCTTTGGATAATTTATCTGGAAGAAGGAAAAACCTCAAGAGTAGTGATTTTGTTGTTGGAGATAAACTTGGTGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTTTACTACCAAAGAATGTGAATGTGGGTGTGGAAGAGGAGAGGGTGCAGAAGAAGAGGGGTGGAAGAAGCAAGACAGCAACAACAACAACAAAGTTGGATGTCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATTCGAGGAGCTGAAGAATTTGGTGATTTTGAGGAATGGTTCAATTACAGGCTCTCCAGAGCAGCGCCCGAAACATGTGCTGACTTCCTTGGAAGTTTCGTTGCTGATAAAACAAATTCACGGTTCACAAAAGGTGGAAAGTGGCTTGTTTGGAAGTTTGAGGGTGATCGCACTCTTGGTGATTACATGAAAGATCGTAACTTTCCTTCGAACTTGGAATCTGTCATGTTTGGACGTGTCTTGCAAGGCGTAGATTCTTCTAAGCGAAACGCATTGATCATCAAGCAAATAATGCGCCAGATAATTACATCTCTGAAGAAAATTCACAACACAGGAATTGTTCACAGGGATGTGAAGCCAGCTAACTTAGTGGTTACTAGAAGGGGACAGATTAAAATCATTGATTTTGGTGCAGCAACAGACCTGCGGATCGGAAAGAATTATGTTCCCAACCTTGCTCTTTTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTTCCAGAAGAAACACCAAGTCCTCCACCAGCGCCAATTGCAGCTTTACTTTCACCGATTTTATGGCAGTTAAACAGTCCTGATTTGTTTGATATGTATTCGGCCGGCATTGTATTGCTGCAAATGGCGATACCGACCTTAAGGTCTTCTTCTGCTTTGAAGAGTTTCAATTCGGAAATAAAAACATGTGGTTATGATATGAGAAAATGGAGGGATTATACTCGCCTCAGGCCGGACTTGCAAGTTCTTGACAGTGAATCTGGTAGAGGGTGGGACTTAGCAACAAAGCTTATCTCTGAGAGAGGTTCCCTAAGAAGAGGACGTTTATCGGCCGCTGCTGCTTTGAGGCACCCTTATTTCCTTCTAGGTCAAGGTGATCAAGCTGCAGCAGTAATATCAAAGTTAAGCTTAACAAGAAAATGA 1536 0.4082 MNIMPSLLSPTTALKQHNHITICFSPFKPTTPTYNNNNNVSFKGCSNSSKCHAFFDDISNGLLENSVIQSGIMQVERVSEDLSDMQRWSFLIFGGLTWIYLTARPGVLVGAIDAYLLAPLQLALDNLSGRRKNLKSSDFVVGDKLGEGSFGVVYSGVLLPKNVNVGVEEERVQKKRGGRSKTATTTTKLDVKSKDKVILKKVKVGIRGAEEFGDFEEWFNYRLSRAAPETCADFLGSFVADKTNSRFTKGGKWLVWKFEGDRTLGDYMKDRNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHNTGIVHRDVKPANLVVTRRGQIKIIDFGAATDLRIGKNYVPNLALLDPDYCPPELYVLPEETPSPPPAPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSSSALKSFNSEIKTCGYDMRKWRDYTRLRPDLQVLDSESGRGWDLATKLISERGSLRRGRLSAAAALRHPYFLLGQGDQAAAVISKLSLTRK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0137 511 SUPERFAMILY Protein kinase-like (PK-like) 134 492 IPR011009 -
Lan12g0137 511 Gene3D Transferase(Phosphotransferase) domain 1 289 493 - -
Lan12g0137 511 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 3 509 IPR044803 GO:0004674|GO:0009579
Lan12g0137 511 Pfam Protein kinase domain 298 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0137 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Lan12g0137 511 Gene3D Phosphorylase Kinase; domain 1 125 258 - -
Lan12g0137 511 SMART serkin_6 139 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0137 511 ProSiteProfiles Protein kinase domain profile. 139 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0137 511 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 3 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0137 Lan-Chr12 1582804 1586608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0137 305 491 AGC Kinase Gene Family AT3G10540 29.534 1.28e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lan12g0137 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0137 - - gmx:100786843 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0137 12 1582804 1586608 Lan12g0137 12 1582804 1586608 ECH