Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0136 ATGGAACACCATCATCACCCCCTTAAGGATAAAAGGAATGTTGAGAAAAGTGTTGAATTCCATGATCATAATTCCAGACTTATTTACATCAATGACCCTAACAAAACCAATGCAAATTACAACTTCACAGGTAATCAAATCCGAACAAGCAGATACACTCTCCTCACTTTCTTCCCAACCAATCTCTTCTACCAGTTTCACCGCCTTGCTTATCTCTACTTCCTTGTTATCTGTGTCCTCAACCAGCTTCCTCCACTCGCTGTTTTCGGTCGAACTGCCTCCCTTTTCCCTCTTTTGATTGTTCTCTCTGTCACAGCTATCAAGGATGCTTACGAAGATTTACGTAGACATAGATCCGATCGCAACGAGAATAACCGCCAGGCCCATGTCCTTAACTCTTCTCACTTTCAATTCAAGGCATGGCAAAACATACAAGCTGGTGATGTTGTTCAAATCTATGCTGATGATATGATTCCAGCCGATATCGTCTTACTAGGGACTAGTAATCAAACTGGAATTGCATACATTCAGACCATGAATTTAGATGGTGAATCAAATTTGAAGACTAGGTATGCTAGGCATGAAACAGCTTCTGTCATATCTCAACAGCATTGTCCTGTCTCTGGAGTTATTAGGTGCGAACACCCGAATCGAAATATCTATGAATTCACAGCTAACATGGAGTTCAATGGCCATAAGTTTCCACTTAACCACTCCTACATTGTTCTCCGTGGTTGCATACTTAAGAACACGGATTGGATAGTTGGTGTTGTGGTGTATGCAGGACAGGAAACAAAGGCAATGCTGAACAGCGCCGCTTCGCCTTCGAAAAGAAGCAAACTTGAGAGTTACATGAATAGAGAGACATTTTTTTTGTCTGGTTTTCTTTTTGTAATGTGTTCGGTCGTGGCCTTAGGTATGGGTCTATGGCTGCTACACCACAAGGACGAGCTTGATACTCTGCCTTACTATAGAAAAAGATACATGAACAACGGGCCGGATTATGGAAAGATGTATAAATATTATGGGATACCAATGGAAACATTCTTCTCCTTTTTGAGTTCAATTATAGTCTTCCAGATAATGATTCCAATATCTCTTTACATTACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTTATGATTGAAGACAAGGATATGTATGATGCTAGCTCTGGGTCAAGGTTCCAGTGTAGATCATTGAATATAAATGAAGACTTGGGTCAGATACGCTACGTGTTTTCGGACAAGACTGGAACACTAACAGAAAACAAAATGGAATTTCAAAGAGCTAGTATACATGGCAAGAGTTATGGTAGCTCCTTGCTTATGGCTGATAATAAGAATACAGCATCGACTACTAGTGGTAAAAAGAGATGGAAGCTCGAATCTGAAATTCCCGTTGATTCTGAACTAATGACATTGTTGCAAAAAGACTCAAATGGAGATGAAAGAGTTGCTGCTCACGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGGTCCCTATTCTAAGTGGCAGTAAGTTTTCGAGTTGCCGAGCAAGTGAATCAAATGAAGATGTAGAAAGTATTGATTACCAAGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCGCTGCATATGGATATACTCTCTTCGAGCGTACATCTGGACATATTGTTATTGATGCCAATGGTGACAAACTCAGGTTAGATGTGTTGGGCCTGCACGAGTTTGATAGTGTGCGAAAGAGAATGTCTATCGTTGTTCGATTTCCTAACAATGTTGTAAAGGTGTTGGTTAAAGGCGCTGATACTCCAATTTTTAGCATTCTAGAAAACATAAATGCAAGTAACAATAGCATACAACATGCAACTCAGACTCACTTGAGTGAATACTCTTCGGAAGGTTTACGTACTCTTGTAGTTGCTTCCAGGGATCTTTCAGATGTAGAACTTGATGAGTGGCAAAGCATGTACCAAGTTGCAAGCACTTCATTGACTGACCGAACTGCGAAATTCCGTCGAACAGCAGCCCTTGTAGAATGCAACTTAAAGCTACTTGGAGCAACTGCAATCGAGGACAGGCTGCAAGAGGGTGTACCTGAAACAATCGAGTCTCTACGCCAAGCTGGAATCAAGGTCTGGGTTCTTACAGGTGATAAGCAAGAGACCGCAATTTCAATAGGCCTTTCCTGCAAACTTCTCTGTGCAGATATGCATCAGATTATTATAAATGGAAAGTCAGAGGCTGAATGCAAAAATCTCTTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGAGGACATCAGAATATGAAGCACAAAACCAATACTAGACATAATGGTCATGACATTAAAAATGATACTAAGTCATTGAGTACACCCAAGTGGAATCCAATAAAAGAAGAAGAATCTAATGCTTCATTGGCACTCATAATCGACGGAACCAGTTTGGTTTATATTCTAGAAAAGGAACTGGAGTTAGAGCTTTTCGACCTTGCAACTTCGTGTAGGGTTGTGCTATGCTGCCGCGTTGCACCTTTGCAAAAAGCAGGCATTGTCGATCTAATAAAGAGCCACACTGATGACATGACATTAGCTATAGGTGATGGGGCCAATGATGTGTCGATGATCCAAACGGCCGATGTTGGTATTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTAATGGCCTCAGATTTTTCAATGGGTCAATTTCGGTTCTTGAAAAAATTACTTCTGGTTCATGGCCACTGGAATTATCAGCGCATCGGCTATTTGGTTCTCTACAACTTCTACCGTAACGCTGTCTTTGTGTTGATGTTATTCTGGTATATATTATGTACAGCTTTTTCTACAACTTCTGCACTAACAGATTGGAGTAGTGTATTATATTCTGTGATATACACATCTATACCTACTGTCATTGTTGGTACTCTAGACAAAGATTTGAGTCATAGTACACTCTTTGAGTATCCAAAACTATATGGCGCGGGTCATCGGCACGAGGCTTATAATTTGCAATTATTTTGGATCACAATGGTTGACATGCTATGGCAGAGTCTTGTACTCTATTATGTTCCTATATTCACCTATAAGGACAGCTCAATTGATATATGGAGCATGGGTAGTTTGTGGACAATTTCAGTTGTTATCCTTGTAAATGTGCACCTAGCTATGGACATTAAGAATTGGGTGTTAATTATTCATGTTGCTGTTTGGGGATCAATAACTATTGCATATGGTTGCATGGTGGTATTGGATTCTATACCCATCTTTCCCAATTACTGGACTATTTATCATCTAGCAAGGTCTCCTACATATTGGATAACGATTTTGCTTATAACAATCGTGGCGTTGCTCCCTCGGTTTATTTGTAAAGCTGTTAAACAAACATTTTGGCCTTCGGATATCGAGATTGCTAGAGAAGCTGAGGCAATGAGAAGTAAACAAAAAGATGATCTACAATGA 3477 0.4038 MEHHHHPLKDKRNVEKSVEFHDHNSRLIYINDPNKTNANYNFTGNQIRTSRYTLLTFFPTNLFYQFHRLAYLYFLVICVLNQLPPLAVFGRTASLFPLLIVLSVTAIKDAYEDLRRHRSDRNENNRQAHVLNSSHFQFKAWQNIQAGDVVQIYADDMIPADIVLLGTSNQTGIAYIQTMNLDGESNLKTRYARHETASVISQQHCPVSGVIRCEHPNRNIYEFTANMEFNGHKFPLNHSYIVLRGCILKNTDWIVGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETFFLSGFLFVMCSVVALGMGLWLLHHKDELDTLPYYRKRYMNNGPDYGKMYKYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASIHGKSYGSSLLMADNKNTASTTSGKKRWKLESEIPVDSELMTLLQKDSNGDERVAAHEFFLTLAACNTVVPILSGSKFSSCRASESNEDVESIDYQGESPDEQALVSAAAAYGYTLFERTSGHIVIDANGDKLRLDVLGLHEFDSVRKRMSIVVRFPNNVVKVLVKGADTPIFSILENINASNNSIQHATQTHLSEYSSEGLRTLVVASRDLSDVELDEWQSMYQVASTSLTDRTAKFRRTAALVECNLKLLGATAIEDRLQEGVPETIESLRQAGIKVWVLTGDKQETAISIGLSCKLLCADMHQIIINGKSEAECKNLLADAKAKYGVKSSSGGGHQNMKHKTNTRHNGHDIKNDTKSLSTPKWNPIKEEESNASLALIIDGTSLVYILEKELELELFDLATSCRVVLCCRVAPLQKAGIVDLIKSHTDDMTLAIGDGANDVSMIQTADVGIGICGQEGRQAVMASDFSMGQFRFLKKLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVLYSVIYTSIPTVIVGTLDKDLSHSTLFEYPKLYGAGHRHEAYNLQLFWITMVDMLWQSLVLYYVPIFTYKDSSIDIWSMGSLWTISVVILVNVHLAMDIKNWVLIIHVAVWGSITIAYGCMVVLDSIPIFPNYWTIYHLARSPTYWITILLITIVALLPRFICKAVKQTFWPSDIEIAREAEAMRSKQKDDLQ* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0136 1158 Gene3D - 412 424 IPR023214 -
Lan12g0136 1158 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 42 1145 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan12g0136 1158 Pfam Phospholipid-translocating P-type ATPase C-terminal 898 1138 IPR032630 -
Lan12g0136 1158 SUPERFAMILY Calcium ATPase, transmembrane domain M 43 1137 IPR023298 -
Lan12g0136 1158 Gene3D - 526 662 IPR023299 GO:0000166
Lan12g0136 1158 Pfam Cation transport ATPase (P-type) 518 607 - -
Lan12g0136 1158 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 26 1154 - -
Lan12g0136 1158 CDD P-type_ATPase_APLT_Dnf-like 44 1030 - -
Lan12g0136 1158 SUPERFAMILY Calcium ATPase, transduction domain A 125 267 IPR008250 -
Lan12g0136 1158 Gene3D - 399 411 - -
Lan12g0136 1158 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 26 1154 - -
Lan12g0136 1158 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 956 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan12g0136 1158 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 678 734 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan12g0136 1158 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 348 439 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan12g0136 1158 Gene3D - 682 910 IPR023214 -
Lan12g0136 1158 Gene3D - 425 460 IPR023299 GO:0000166
Lan12g0136 1158 Pfam haloacid dehalogenase-like hydrolase 640 731 - -
Lan12g0136 1158 SFLD p-type atpase 399 921 IPR044492 -
Lan12g0136 1158 Gene3D - 97 271 - -
Lan12g0136 1158 SFLD Haloacid Dehalogenase 399 921 - -
Lan12g0136 1158 Pfam Phospholipid-translocating ATPase N-terminal 28 93 IPR032631 -
Lan12g0136 1158 SUPERFAMILY HAD-like 410 916 IPR036412 -
Lan12g0136 1158 PRINTS P-type cation-transporting ATPase superfamily signature 415 429 - -
Lan12g0136 1158 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Lan12g0136 1158 ProSitePatterns E1-E2 ATPases phosphorylation site. 417 423 IPR018303 -
Lan12g0136 1158 Pfam E1-E2 ATPase 125 373 - -
Lan12g0136 1158 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 421 698 IPR023299 GO:0000166
Lan12g0136 1158 MobiDBLite consensus disorder prediction 764 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0136 Lan-Chr12 1575439 1580524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0136 19 1149 Primary Pumps ATPases AT5G04930 54.947 0.0 1276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0136 K14802 - gmx:100788740 1863.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0136 12 1575439 1580524 Lan12g0136 12 1575439 1580524 ECH