Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan12g0115 | ATGATAATAATATACAAAGAAACTACAATTTCAGAAACAATGCTATCTTCTCTCTCACTCATGCCATCTCTTCATTGTAACTCTCGATTAACAGATGGATGCAAAGATCAGAAATCAAAGGATAAAATTGTGGAGAATAGTTGCTTATTAAGAAGGAAACTTATCCTTTCTGTTTTGGTCTCAAGTGCTGTTTTTCCGACATTATCTTCGTATGCAAAGTCGAAGAGTAAGAATCCATATGATGAGAATAGGTTGCTACAACAAAATAGGCGAATACAGAAAGAAAATAATGTACCAGATGACTTCCCAAATTTTGTTAGAGAAGGTTTTGAGGTTAAAGTATTATCATCAGATAACTATGTAAAGCGTGATTCAGGGCTCCTATACCTAGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCATTTTTCACTATGTTGGCTATAACGAATCTGGTCGTCGTATCGACAGCACTTATTTGCAGGGCTCACCTGCCAGAATCCGCATGGGCACAAACTCATTGGTTCCAGGATTTGAAGAAGGAATTAGAGACATGAGACCAGGAGGAAAGAGAAGAATCATTATTCCTCCCGAACTTGGACCACCGGTAGGACCTTCTACGTTTTTCAGCGCAAAACAGTTCGAAGTTTTTGATGTTGAACTATTAAGCATACAAAACTGCGAAAGAAGGACGATCGCCTTTTACTCGGATGTTGTATGCAATTGA | 741 | 0.3846 | MIIIYKETTISETMLSSLSLMPSLHCNSRLTDGCKDQKSKDKIVENSCLLRRKLILSVLVSSAVFPTLSSYAKSKSKNPYDENRLLQQNRRIQKENNVPDDFPNFVREGFEVKVLSSDNYVKRDSGLLYLDFEVGKGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRMGTNSLVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSIQNCERRTIAFYSDVVCN* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan12g0115 | 246 | SUPERFAMILY | FKBP-like | 71 | 230 | - | - | |
| Lan12g0115 | 246 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC | 21 | 246 | IPR044239 | - | |
| Lan12g0115 | 246 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 140 | 226 | IPR001179 | GO:0003755 | |
| Lan12g0115 | 246 | Gene3D | - | 106 | 238 | IPR046357 | GO:0003755 | |
| Lan12g0115 | 246 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 143 | 230 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan12g0115 | Lan-Chr12 | 1332962 | 1336814 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan12g0115 | 133 | 232 | Calmodulin-binding Proteins | AT5G48570 | 29.907 | 3.32e-10 | 57.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan12g0115 | - | - | gmx:100305486 | 383.645 |