Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0107 ATGGATGAATGTGGAAGCCCAATCTCTCTCTCTCAAATGTCCAACACCTCAGAAGAAGAGCCATTTGATCTGAATACCCTAAACAGTAATGGTGATGTAACAAATGGTTGGTCATGTCCCCACCGCAAACAACCATCCTCCTCCATTATGCACCACCATAGCTACTATGAGGGTCATTCACCACCAGAAAAGAAACCTAGAGGAAGACCACCAGGTTCCAAGAACAAGCCAAAACCACCCATTGTGATCACTAGAAACAACGATGATATAATGAAACCTATCCTCATTGAAGTCTCTAATGGCTCCGATGTGGTTGAAGCTTTGATCAAATTTGCACGTAGATACAATGTTTGTATCTCAGTGCTTAGTGGGTCAGGTTCCATTGCTAATGTTACCCTTCACCACCCTCTTCCTTTTTCTACTTCATTTACCGTTCATGGTCCTTTCACTTTGTTAACCCTAACTGGGACCTATTTATTTAGCCCTTCTCATCGTTGTCTTTCTTTCCCTTCTATGGCTGCATCATCTTCATCTTCTAGAATAAACCCTAATCATCTTTATTCTACACCTACTAGTTCTTTTGGGATCACCCTTTTAGGGTCTCAAGGTGAAATCGTTGGTGGGGTTGTTGCTGGGAAAGTTATTGCAGGATCTATTGTGTCTGTTATGGTTACTGTGTTCAAGAATCCAGAGTTTTATAAGATTGGATTCAATGGAAATGATGGAGGTGGTGTTGATGAAGATGATCATAATCCTAATGCAAGTGGAAATGATAACATGTCTGGTTTTCTGATTCCACAAAATCATTATGTTGATGTTAATGCGATCCAATGGGGTCAAAATCATACCCCAAACTCTACTTGCCCTAGAAATTACTAA 879 0.405 MDECGSPISLSQMSNTSEEEPFDLNTLNSNGDVTNGWSCPHRKQPSSSIMHHHSYYEGHSPPEKKPRGRPPGSKNKPKPPIVITRNNDDIMKPILIEVSNGSDVVEALIKFARRYNVCISVLSGSGSIANVTLHHPLPFSTSFTVHGPFTLLTLTGTYLFSPSHRCLSFPSMAASSSSSRINPNHLYSTPTSSFGITLLGSQGEIVGGVVAGKVIAGSIVSVMVTVFKNPEFYKIGFNGNDGGGVDEDDHNPNASGNDNMSGFLIPQNHYVDVNAIQWGQNHTPNSTCPRNY* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0107 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 260 - -
Lan12g0107 292 ProSiteProfiles PPC domain profile profile. 88 251 IPR005175 -
Lan12g0107 292 MobiDBLite consensus disorder prediction 1 84 - -
Lan12g0107 292 MobiDBLite consensus disorder prediction 7 53 - -
Lan12g0107 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 232 - -
Lan12g0107 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 228 IPR005175 -
Lan12g0107 292 CDD DUF296 92 227 IPR005175 -
Lan12g0107 292 Gene3D - 91 241 - -
Lan12g0107 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 260 IPR014476 GO:0003680
Lan12g0107 292 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0107 Lan-Chr12 1251941 1252819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0107 64 264 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 38.835 2.26e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0107 - - lang:109361806 535.413