Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0089 ATGGCTTCTTCTTCCTCTCCAACTGATCCTTCTCCACCCTTTGCCGTCCCTCTCCTCCCTCCTCCTCCCTCCTCCCGCCGCCTCCCTCCGCCGTGTTGGTCCCCGGAGGAAACCTCCTCCCTTATCGACTCCTACCGCCAAAAATGGTACTCCCTTGGCCGGAGCAACCTCAAGGCTACTCACTGGCAGGAAGTTGCTGACGCTGTAACCGCTTCTTGCCCTAACGTATCTCCTCCTAAAACCGCCGTGCAGTGCCGCCATAAGATGGAGAAGCTTCGGAAGCGTTACCGCACTGAGATCCAACGCGCGAGGAACCTTCCTGTTAAGAAATTCAATTCGGCTTGGCTGCATTTCAATCTAATGGATTCTATGGAGAAAGGTCCTTCTCCTGCGAAATCGGATTTCGTTAAGGTTGATGATGATGACGACGAAGATGATGATGAGGATCATGATTTAATCCACGCGAATTCGCTTTACAAATTGCGAAGGAATGGAATTGGAAGTTCAGGAGGAGGTGGTGGTGGCGGTGGTGGTGATGGTTGGAGAGGTGAGGGAGCGTTTCGGATTAGAATTCCTAGTGGTGTGAGTGTAGCCAAACCTGATTCGAGGTTTTATCCGAAATTTAGTGATGAGAAAAGGAACCCTAATTATGGTTTTGGGGGAAAAGGTGTGAAGGAGGGAAGTGGATTGGGGAAAAGGGAGAGGGAGAAGGATCCGGTGGAGGAAATGGTGAATGCGGTCAAGGTTTTGGCAGAGGGATTCATGAGGACAGAGCAGATGAAGATGGAGATGGCCAGGGAGATCGAAAGAATGAGGATGGAGAGGGAGATGAAGCGAACCAAGATGATTTTGGAGTCACAACACAGGATTGTCGAAGCTTTCGCTAATGCTGTCGCCGAGCAGAAGAAGAAAACTAATCAGGTGCCATCATCACCTGAATCATAG 945 0.5037 MASSSSPTDPSPPFAVPLLPPPPSSRRLPPPCWSPEETSSLIDSYRQKWYSLGRSNLKATHWQEVADAVTASCPNVSPPKTAVQCRHKMEKLRKRYRTEIQRARNLPVKKFNSAWLHFNLMDSMEKGPSPAKSDFVKVDDDDDEDDDEDHDLIHANSLYKLRRNGIGSSGGGGGGGGGDGWRGEGAFRIRIPSGVSVAKPDSRFYPKFSDEKRNPNYGFGGKGVKEGSGLGKREREKDPVEEMVNAVKVLAEGFMRTEQMKMEMAREIERMRMEREMKRTKMILESQHRIVEAFANAVAEQKKKTNQVPSSPES* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0089 314 MobiDBLite consensus disorder prediction 126 148 - -
Lan12g0089 314 MobiDBLite consensus disorder prediction 216 239 - -
Lan12g0089 314 ProSiteProfiles Myb-like domain profile. 33 93 IPR001005 -
Lan12g0089 314 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 7 311 IPR044823 -
Lan12g0089 314 SMART 118neu2 40 129 IPR006578 -
Lan12g0089 314 Gene3D - 33 98 - -
Lan12g0089 314 PANTHER TRANSCRIPTION FACTOR 7 311 - -
Lan12g0089 314 Pfam Myb/SANT-like DNA-binding domain 31 124 IPR044822 -
Lan12g0089 314 Coils Coil 86 106 - -
Lan12g0089 314 MobiDBLite consensus disorder prediction 1 38 - -
Lan12g0089 314 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0089 Lan-Chr12 987027 988740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0089 32 124 Trihelix Transcription Factor Family AT3G14180 34.409 3.67e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan12g0089 Myb_DNA-bind_4 2.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0089 - - vun:114179736 308.145