Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0082 ATGTCCTTCAATCAATCGAAATCGGATAAGAGCGAGGCTGTGTATCGGAAATCCGGCCGATCCGGCAGCTTCAATCAGCACCGCGGTTCCTCAGCCTCTTACGTCAAGGCCGGTGACGGCCCCGCCTCCTCTGCCCGGAGTTTTAACAAGAAGCCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACCACAGTGAATTCAACAGAGGCTAATGCTAACCGTAACATACAGAACGCTACCAATGTACGACCTCAATTACATGGAGCACCTGATGCATCAGTTACAACCAAGCTATCTGAATCATCTGCTGCACCGAGGAGCAGTGTAGTTGTTCCAAAAGCTCCTACTTCTCAACTGGTGCCCCCCATTAGTTCTGATTCAGCCGCCCCTACAACCCCCTCTAAGGGAGATGTGTCCAAGGCATTCCCTTTCCAATTTGGATCCATTAGTCCCGGCTTTATGAATGGGATGGCAATTCCAGCCCGCACTAGCTCAGCTCCGCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCTTAGATCTGTGCCTTCAGGGCCGACACCCCCTGTTCCAAAGCAGCATCAGCCACCTAGAAAAGATGCAGTTGTCACTGAGAAATCTAATTCTGTAGAGACTCATACAATAACTAAGGGAAGGAAGGATCCTCAGGTATCAGCTTCGACCCCAGCAGTCCTGATTCAAAAGCCTTCAGTTGTTCCTGTAACAGGGATTTCAATGCCAATGCCATATCATCATTCACCGGCATCTTTACAGTTTGGTGGTCCTACTCAACAGATTCAACCTCAGGGTATGTCAATAACATCTCTCCAGATGCCCATACAAATACCTATACCAATTGGAAATGCTTCCCAAGTGCAACAACAGGTTTTTGTTCCTGGTCTTCAATCTCATCCAATGCATCATCAAGGGATAATGCATCCAGGCCAAAACATGAGTTTTAATCATCCAATGGGTCACCACCTTTCCCATCAGTTAGGCAGCATGGGCATTGGCCCCCAATATCCTCAGCAGCAAGGAGGACAATTTGCTCCTCCTCGAAAAACTACTACCGTGAAGATTACTCATCCCGAGACACACGAAGAGCTGAGGCTTGATAAAAAAACGGATGCTTATTCAGATGGTGGGACATCTGGTGTTAGATCGCATCCTAGCAGGCCTTCTCAATCTCAGCCAGTTCAATCTCTTGCAGCTTCTCATCCCATGAACTATTATTCTAGTTCCTTTAATACAGGTTCTATCTATTTTCCACCTCCTAGTTCTCTTCCGCCAACAAGTGTCCAGATAACTCCTAATCCTAAATCACCAAGATTTAATTATCCAGTGAACCATGGACCCCAAATTGCCGGTTTCAAGAATTCATCATCACTTGGTTCTCCACCTGTTAATAAAGCTAGCACTCCTATTATTGGCATTGTTGAAACACATAAATCAGAAAGTTCTCGTGATGTGCCTAATGCACTGTCATCAGCTCCACTTGGAGTAACTTCTGTACCTATTAAGACAAGTGGTGCCTCTGCTGTTGTGGACTCATCGTCGCCCATTTCCAGCATTTCTGGTGTTCAAAATAGAGAATCTAGTTCAGCAGCATCTTATGATACTACCTCCTTTGTACCACAAAAAGGGTCTGAAACTTGTACAGAGAACTCTTCACAGCAGTCTAAATTAGCCAGTGATTCTTCAGTTTTGTGTTCACTGCCAAAACAATCTTCTGCATCTGTTGCTGTACCTTCTGAGAAGGTTACAGCCGCCCCCTTGACGCTTCCTTCATCATCTGCCAATGAAGATTCTGTCTTGGTTGTGTCTAATAATGAAGGCATACGGAATGAATCTCTTAGCAGGTCTAACTCTCTCAAGGATAAACCATTGAAGAAAGGTCAATTACAGCATCAGGTTTCTGTGAAATCTCCTATGGAGGTTAATGTATCTTCTCAAGCTGTTGACAGTGGTATATCTTATACTGGAGTTTCCGAACCTGCAGGAACTGAAACAAACTATTCTGTAGCTGTTAATGCTGAAGTACTTCCATCATCTCTTGACACAATATCAGCTATCAGCAGTAGCATTCCTAGTGCTGTTGAGGTGAAGACCAATTTCTCCGCTGATGTTTCTGCTTGTGTTTCCACTGAAGGATCTGATGTGCAAGGTGCTGATAGTTTGAACAATCATAAGCATGATAATCTAGGTCATTCTTCAGAAGAAGTTAAACAAACTGATCAAGATGCTGCAACAGTAAGCACTGAGATGATAACCTTGAAGACTGTACAGAAACAGCAGGATGAATCTGCAAGTTGCAGCGCCGGATATGACAATGCAGGTTCGCAATCTGCTGATCTTCCAGAAACAACATCAATACTTGTCAAGGGTAGCTCAGAGAACGCTGGCAGTGACTCAGTGTCTCATCCAGTGTCAGGTAATAAGGATAGACAAACTTCAGAAGCAAATAAGGTGAATACTACATCTAAAGCAAGGAAGAAAAGAAAAGAGATTCTTCAGAAAGCGGATGCTGCTGGGTCAATTTCTGATCTTTATAATGCATACACGGGACCTGAGGAGAAGAAAGAAGCTATCCTGAGTTCAGAGAGCACGGAAAATGATTCTACTTCTGGAAGTTTGGAGCAGTTGCCTGCTGATTCTGTTCAATCGGGTGATGTAGCGAGCGAGAAATGTGGGGCAAGTAAAACTGAACCCGATGACTGGGAGGATGCTGCGGACATGTCTACACCAAAACTTGAAGTTGCTGATAAATCAAACCCGGTTAGCGATGAAAGTGGAGGTACAATAAAAAAGTACTCCCGGGATTTCCTTTTGAAATTCTCTGAGCAATGCACCGATCTTCCTGAAGGTTTTGAATCAGCAGACTTTGCTGAGCTGAGAGCTAATATTACTGGTGGTCATGTTATTGAGCGTGATTCACATCATAATCCCGGAAGAAATGTAGATAGGTCGGGTGGGATGTCTCGGATGGATCGCCGTGGAGGTGGTATGAATGAGGAAGACAAATGGAATAAAGTTTCTGGTGCTTTTCATTATGCACGGGGTTTTGATGGTATTGGAGGTAATGCTGGATTTCGAGCTGGCCAAGGGGGAAATGTTGGGGTTTTAAGGAATCCTCGTGCACAGGCACATTTACAATATGCTGGAGGGGTCCTTTCTGACCCAATGCAATCCATGGGAAATCAGGGTGGAATGCAGAGAGCTAGCTTAGATGGTGAAAGGTGGCAGCGTTCTGCTAGCTTCCAGAGGGGTTTGATTCCTTCACCTACAACTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAACAAGTATGAAGTGGGTAAAATACCAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAAGCTATCTTGAACAAACTAACCCCTCAGAATTTTGAGAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGATAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAGCCCACCTTCTGTGAAATGTATGCTAACTTCTGTTCACATCTGGCTTCCGAGTTGCCTGATTTAAGTGAGGGCAATGAAAAGATAACATTTAAGAGATTATTATTAAACAAATGCCAAGAGGAATTTGAGAGGGGTGTAAAAGAACAAGAGGAAGCCAATAAGGCTGATGAGGGAGAGGTCAAACAGTCTGATGAAGAACGGGAAGAGAGAAGGGTCAAGGCTAGAAGACGTATGTTGGGTAACATCCGATTGATAGGAGAGCTATATAAAAAAAGAATGTTGACTGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAGGAAGATATAGAAGCACTATGCAAACTGATGAGCACTATTGGTGAGATGATTGACCATCCCAAAGCCAAGGTTCATATTGATGCATATTTTGAAAGAATAAGGGTACTATCAAACAATATGAATTTGTCTTCTAGGTTGAGGTTCATGTTGAAGGATGCAATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGGCCGAAGAAGATTGAGGAGGTACACAGAGATGCTGTGCAAGAGAGGCAAGCTCAAGCTCAAGCTGGTAGGATGGGTCGTGGTCCGGGCAGCAGTCCATCAGCAAGAAGGAACCCCATGGATTTTGGTCCAAGAGGATCATCAATGTTGTCTTCTCCTACTGCTCAGATGGGTGGACTGCGTGGGCTGCCTACTCAAGTTCGGGGGTATGGTTCTCAGGATGCTCGTTTTGAGGAAAGGCAATCTTATGAGGCAAGGACCTTGTCAGTTCCTTTGCCTCAAAGAACCTTAGCTGATAATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCAATTAGAGGGTCAACAGTAATTTCGAGTTCATCAACTTCTGATGGATTTCCTGTCCCAAGAGACTCTCATAGAATGGCTACCGGTCTTAATGGTTATAACAACTTACAAGAGCGCACACCTTACAATTCAAGGGAGGATCTTGCATCAAGATACACGGTGGATAGGTTTTCTGGTCCAGATACTTCTGACCAATCAAGTGCTCTAGATCGTGATATAAACTATGGTAACAGAGACTTGAGGAATGTAGATCGGAATCTCGACAGACCTGTTGCATCTTCACCTCCTGCTCAATCGCATGTTTCAACAGTCTCCCAGAATGATTCTTCAGAGAAGGCATGGCCAGAAGAGCGACTGCTGGCCATGTCCATGGCAGCAATCAGAGAATACTACAGTGCTAGAGATGACAAGGAAGTTGCATTATGTATCAAAGAATTGAACTCTCCGAGCTTTCATCCTTCTATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACACTGAAAGAGATCTTTTGGCTAAACTTCTAGTCAACCTTGTGAAATCTCCGGATGGCATCTTGAGTCAAGTCCATCTCGTCAAAGGATTCGAATCTGTTCTCAGCACACTGGAAGATGCTGTTAATGATGCCCCCAGAGCACCAGAGTTTCTTGGCCGAATTTTCGCCAAAGCTTTAACGGAGAGTGTAGTCTCTTTGACTGAGATTGGAAGGTTAATACATGATGGTGGAGAGGAGCCAGGGAGTCTCTTGGAAGCTGGGCTTGCAGCTAATGTTCTGGGATGGACCTTGGAGTCAATACAATCCGAAAAAGGGGAAGCTGTTCTAAACGAAATTCGCTCAAGCTCTAACTTGCGGCTGGAAACTTTCAGGCCGCCTAATCCGATCACATCAAGGAAGTTAGAGAAATTTATTAGTGGATAG 5337 0.4439 MSFNQSKSDKSEAVYRKSGRSGSFNQHRGSSASYVKAGDGPASSARSFNKKPNNAQGGQSRVNPTTVNSTEANANRNIQNATNVRPQLHGAPDASVTTKLSESSAAPRSSVVVPKAPTSQLVPPISSDSAAPTTPSKGDVSKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQALRSVPSGPTPPVPKQHQPPRKDAVVTEKSNSVETHTITKGRKDPQVSASTPAVLIQKPSVVPVTGISMPMPYHHSPASLQFGGPTQQIQPQGMSITSLQMPIQIPIPIGNASQVQQQVFVPGLQSHPMHHQGIMHPGQNMSFNHPMGHHLSHQLGSMGIGPQYPQQQGGQFAPPRKTTTVKITHPETHEELRLDKKTDAYSDGGTSGVRSHPSRPSQSQPVQSLAASHPMNYYSSSFNTGSIYFPPPSSLPPTSVQITPNPKSPRFNYPVNHGPQIAGFKNSSSLGSPPVNKASTPIIGIVETHKSESSRDVPNALSSAPLGVTSVPIKTSGASAVVDSSSPISSISGVQNRESSSAASYDTTSFVPQKGSETCTENSSQQSKLASDSSVLCSLPKQSSASVAVPSEKVTAAPLTLPSSSANEDSVLVVSNNEGIRNESLSRSNSLKDKPLKKGQLQHQVSVKSPMEVNVSSQAVDSGISYTGVSEPAGTETNYSVAVNAEVLPSSLDTISAISSSIPSAVEVKTNFSADVSACVSTEGSDVQGADSLNNHKHDNLGHSSEEVKQTDQDAATVSTEMITLKTVQKQQDESASCSAGYDNAGSQSADLPETTSILVKGSSENAGSDSVSHPVSGNKDRQTSEANKVNTTSKARKKRKEILQKADAAGSISDLYNAYTGPEEKKEAILSSESTENDSTSGSLEQLPADSVQSGDVASEKCGASKTEPDDWEDAADMSTPKLEVADKSNPVSDESGGTIKKYSRDFLLKFSEQCTDLPEGFESADFAELRANITGGHVIERDSHHNPGRNVDRSGGMSRMDRRGGGMNEEDKWNKVSGAFHYARGFDGIGGNAGFRAGQGGNVGVLRNPRAQAHLQYAGGVLSDPMQSMGNQGGMQRASLDGERWQRSASFQRGLIPSPTTPQTPLQMMHKAENKYEVGKIPDEEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDLSEGNEKITFKRLLLNKCQEEFERGVKEQEEANKADEGEVKQSDEEREERRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHIDAYFERIRVLSNNMNLSSRLRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAVQERQAQAQAGRMGRGPGSSPSARRNPMDFGPRGSSMLSSPTAQMGGLRGLPTQVRGYGSQDARFEERQSYEARTLSVPLPQRTLADNSITLGPQGGLARGMSIRGSTVISSSSTSDGFPVPRDSHRMATGLNGYNNLQERTPYNSREDLASRYTVDRFSGPDTSDQSSALDRDINYGNRDLRNVDRNLDRPVASSPPAQSHVSTVSQNDSSEKAWPEERLLAMSMAAIREYYSARDDKEVALCIKELNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLVNLVKSPDGILSQVHLVKGFESVLSTLEDAVNDAPRAPEFLGRIFAKALTESVVSLTEIGRLIHDGGEEPGSLLEAGLAANVLGWTLESIQSEKGEAVLNEIRSSSNLRLETFRPPNPITSRKLEKFISG* 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0082 1778 Pfam MA3 domain 1596 1701 IPR003891 -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 862 911 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 514 562 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 94 136 - -
Lan12g0082 1778 ProSiteProfiles MI domain profile. 1588 1712 IPR003891 -
Lan12g0082 1778 SUPERFAMILY ARM repeat 1582 1774 IPR016024 -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 727 745 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 364 379 - -
Lan12g0082 1778 SMART if4_15 1126 1348 IPR003890 GO:0003723|GO:0005515
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1526 1542 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 869 889 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 720 750 - -
Lan12g0082 1778 SMART ma3_7 1589 1703 IPR003891 -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 764 840 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 162 230 - -
Lan12g0082 1778 Gene3D - 1126 1361 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 764 826 - -
Lan12g0082 1778 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 115 1766 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1498 1517 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 18 32 - -
Lan12g0082 1778 Coils Coil 1219 1239 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 364 406 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1 138 - -
Lan12g0082 1778 SUPERFAMILY ARM repeat 1120 1350 IPR016024 -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 200 220 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1401 1415 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 46 86 - -
Lan12g0082 1778 Pfam MIF4G domain 1126 1348 IPR003890 GO:0003723|GO:0005515
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1562 1580 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 383 406 - -
Lan12g0082 1778 Gene3D - 1581 1778 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1476 1582 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1371 1440 - -
Lan12g0082 1778 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 115 1766 IPR045208 GO:0003743
Lan12g0082 1778 MobiDBLite consensus disorder prediction 1219 1242 - -
Lan12g0082 1778 MobiDBLite consensus disorder prediction 976 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0082 Lan-Chr12 812747 821524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0082 1 1775 Eukaryotic Initiation Factors Gene Family AT3G60240 45.962 0.0 1271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0082 K03260 - gmx:100796636 2151.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0082 12 812747 821524 Lan1g0924 1 19950521 19958682 LSH
Lan12g0082 12 812747 821524 Lan1g2063 1 35811222 35820280 LSH