Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0072 ATGCTTTGGGAGGATTTCTCCAACATGTTGAATGCAACAAAGCTCAGAACTATGTATTGGACTTCATGGCTTCCATTAGAGTCACCATGCTTATTGGAACATGTAACTTTACCTGTGGAACTTGTATTCTTTGTGATCTTATTAATCCAAATTCTCAGAAAAAGTTTGAACCTGATTAGCAAAAAGAACAAAGTCTCAGAACAAGGTATCACAGAGATTCATAATCCAACAGTGATAAAATCTGGTTTTGCTTACAAAATCAGCATAGTTTGCACCATTTTATTACTAGCTGTTCATGCATCAATGCTAGTGTTATTGAATCTGAATCATGAGACACAGTGTAACTCTAAAGTTAAGGCTTTTACATCAGAGATAATTCAAGTGTTATCATGGGGAATTAGTCTTATAGCAATATTCAAGATATCAAAATCAAATGTTTATTTCCATTGGATTCTAAGGATTTGGTGGATTTGCAGTTTCATTCTGAGTGTGATTAGTACTACTCTTCATGTCGATTTTAGTTTCACAAATATCGGTCAAATTGGTATACGAGAATATGCAGATTTCATTGGTTTGATTGCTTCAACAATCCTTTTGATTATCTCATCAAGAGGGAAAACAGGCATTGTCTTAATTGCTGCTACAAATGGCTTATCTAGCCCTCTTCTCGGAGAGAAAACTGAGAAAGTTTCGGATCGTGAAAGGGATTCTCCATATGGAAAAGCGACTTTTACACAAATGATTAGCTTCTCTTGGCTCAATCCCTTGTTTGCTGCAGGATACAAGAAGCCTCTTGATCAGGATGACATTCCCAATGTCGATATCAAGGACTCTGCGGAGTTTCTATCGAGTTCCTTTGATGATAGCCTTAGACAAGTCAAAGAAAAAGATGGTACTACATACCCGTCTATCTACAAGGCAATCTATTTATTCGCTAGGAAGAAAGCGGCGATGAACGCGCTTTTCGCAGTAATAAGTGCTTCAGCATCATATGTCGGTCCGTACTTGATTACCGACTTTGTGGATTTCCTAGGGGAAAAGGAAGCTCTTGGCTTGAGGACCGGGTACCTTCTATCATTGGCCTTCTCATGTGGCAAAATGGTTGAAACAATATCTCAAAGGCAATGGAATTTCGGAGCGAGGCAGTTAGGCCTTCGCCTTAGAGCTGCATTGACAACACACATATATAAGAAGGGCTTAAACCTGTCGAGTAGATCGCGCCAAAGTCATTCGGGTGGTGAGATAATGAACCTCATGAGTGTAGATGTGCAGAGAGTCACGGATTTCGTTTGGCAGGTAAACGTAATTTGGATGCTGCCGGTGCAAATTTCTTTAGCAGTCTACATTCTGCATACAAATCTCGGATTAGGTTCAATGGCCGCATTAGCCGCTACATTGGCTGTTATGGCTTTGAATATACCTCTCACTAAAGTACAGAAAAGATACCAATCCAAGATCATGGAGGCTAAGGATGAGAGAATGAAATCCACTTCGGAAATTCTGAGAAACATGAGGACTTTGAAGCTTCAAGCATGGGATACTCAATTTGGTGAAAGGATAGAAACATTGCGGAAAAATGAGTATCATTGGTTAATGAAGTCATTAAGACAAGCTGCACTTTCGGCTTTTATCTTTTGGGGATCACCTACATTCATTTCGGTGATAACCTTTTGGGCATGTATGTTCATGGGAATTGAACTTACGGCTGCAAGGGTCTTATCGGCTTTCGCAACGTTCCGAATGTTACAGAGTCCTATATTTAGCCTGCCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCAGTTGATAGGATTGCTTCTTACCTTAAGGAGGAAGAAATCCAACACGATGTCATTGAATATGTCGCGAAGGACAGAACAGAAACCGACATAGTTATTGATAAAGGGAGGTTCAGCTGGGATCCTGATTCAAGAAGTCCAACCATTGATGAGATAGATTTAAAGGTTAAGAGAGGTATGAAGGTGGCGATTTGTGGATCCGTAGGTTCGGGAAAGTCTAGTCTTCTCTCGGGCATTTTGGGAGAAATATATAAACAGTCCGGGACAGTGAAGATCAGTGGAACAAAAGCTTATGTTCCGCAGTCGCCGTGGATTCTAACAGGAAACATTCGGGAGAATATTACCTTTGGAAAGGAGTATGATCATGATAAGTACGAAAAAACAGTGGAAGCTTGTGCATTGAAAAAGGACTTTGATTTATTCTCCGGTGGTGATCTCACAGGGATAGGAGAAAGAGGGATCAATATGAGTGGAGGACAGAAGCAAAGGATACAAATAGCTCGAGCAGTTTACCAAGACGCCGATATATATCTTCTCGATGACCCTTTCAGTGCTGTTGATGCTCATACCGGCACGCACCTCTTTAAGGAGTGCCTAATGGGGATTCTGAAAGAGAAAACTGTGCTTTTCGTCACACACCAAGTCGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGAAAAATGGAAAGATTGCACAAGCCGGAAAATACGCGGAACTTCTAAAGCAAAATATAGGATTTGAAGTCTTAGTAGGTGCTCATAATGTAGCTCTAGAGTCAGTTCTAATGGTTGAAAAATCAACTAGAACAGCTCTAGCTGAAAGGGAATCAAGCATCAATTCCAGCTCAAGTATTAAACCTGTTCACATACAGCAAGACTCGGCGCAAGATAGTCCTCCGGATAGCAAGGGAAACGATGGAAAATTGGTACAAGATGAAGAAAGAGAAAGAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATATGACAACTTTCAAAGGTGGAATTATGGCTCCAGTCATAGTTTTGGCACAGACTTCATTCCAAATACTTCAGATTGCAAGTAACTATTGGATGGCTTGGGTTTGTCCGACAACAACCGATGCTAAGCCTCTATTCGAGATGAATTTCATACTACTTGTTTATATGGCACTATCTATTGCTGGTTCACTTTGTGTTCTGCTGAGAGCTATGTTGATAGCTAGTGTTGGACTTGAGACAGCACAGACACTTTTCACAAACTTGTTGCGTAATGTGCTCCGAGCGCCCATGTCGTTTTTCGATTCAACCCCAACTGGAAGAATCTTGAACAGGGCCTCCTCAGATCAAAGTGTGTTGGACTTGGAAATGGCAACCAAATTAGGATGGTGTGCCTTCTCCGTAATAGAGATTATCGGTACTATTGCCGTAATGTCGCAGGTAGCATGGGAAGTATTTGTCATCTTCATTCCAGTAACTGGAATCTGCATATGGTATCAACGATATTATACACCGACAGCGAGAGAACTGGCTCGCTTAGCACAGATACGAATTTCTCCAATTCTCCACCATTTTTCCGAATCTTTAGCAGGAACAGCATCGATAAGAGCTTTTGATCAAGAAAGCCGTTTCGTATACACAAATCTTGGTCTTGTAGATGGCCACTCAAAGCCATGGTTTCATAATGTTTCTGCAATGGAATGGCTTTCGTTCAGATTGAATTTACTTTCAAATTTTGTTTTCACATTCTCACTGGTTTTGCTAGTGATCCTCCCTGAAGGAATAATCGATCCAAGCATTGCAGGGTTGGCAGTAACATATGGTATCAATCTGAATGTTTTGCAAGCTTCAGTTATATGGAACATATGCAATGCCGAAAATAAGATGATATCGGTCGAAAGAGTTCTTCAGTACTCAAGTATACCACATGAAGCACCTCTTGTGATTGAAGATTCCAGGCCACCTAGGAACTGGCCAGAAACCGGAACGATTTGTTTAAAGAATTTGGAGGTACGTTATGCTGAGCATCTTCCATCTGTGCTGAAAAACATCACCTGTACATTTCCTGGAAGGAAGAAAATCGGTGTAGTAGGACGTACCGGGAGTGGAAAATCGACTCTCATACAGGCTCTTTTCAGGATTGTTGAACCAAGAGAAGGAAGCATTATAATTGACAATGTAGATATATGCAAGATAGGACTCCATGACTTAAGAACAAGGCTTAGCATCATTCCACAAGACCCTTCACTATTTGAAGGCACAGTTAGAGGAAACTTGGATCCATTGCAGCAATACTCAGACAATGAAGTCTGGAAGGCTCTAGATAAATGTCAGCTAGGTGATATAGTGAGGGACAAGAAACAGAAGCTTGAATCACAAGTTGTTGAAAATGGTGAGAATTGGAGTGCAGGCCAAAGACAATTATTTTGTCTAGGAAGAGCTTTACTCAAAAGAAGTAGCATATTAGTGTTAGATGAAGCAACAGCCTCTGTGGATTCTGCTACTGATGGTATGATACAGAAGATCATAAGTCAAGAGTTCGAAGATCGGACTGTCGTCACGATAGCTCATCGGATCCACACCGTTATCGATAGCGATTTGGTTTTGGTGCTTAGTGATGGGAGAATTGCAGAGTATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCATTCTTCTTTAAGCTTATAAAGGAGTATTCAAGGAGATCTCATAGTTTCAACAACATGGAATAA 4521 0.4063 MLWEDFSNMLNATKLRTMYWTSWLPLESPCLLEHVTLPVELVFFVILLIQILRKSLNLISKKNKVSEQGITEIHNPTVIKSGFAYKISIVCTILLLAVHASMLVLLNLNHETQCNSKVKAFTSEIIQVLSWGISLIAIFKISKSNVYFHWILRIWWICSFILSVISTTLHVDFSFTNIGQIGIREYADFIGLIASTILLIISSRGKTGIVLIAATNGLSSPLLGEKTEKVSDRERDSPYGKATFTQMISFSWLNPLFAAGYKKPLDQDDIPNVDIKDSAEFLSSSFDDSLRQVKEKDGTTYPSIYKAIYLFARKKAAMNALFAVISASASYVGPYLITDFVDFLGEKEALGLRTGYLLSLAFSCGKMVETISQRQWNFGARQLGLRLRAALTTHIYKKGLNLSSRSRQSHSGGEIMNLMSVDVQRVTDFVWQVNVIWMLPVQISLAVYILHTNLGLGSMAALAATLAVMALNIPLTKVQKRYQSKIMEAKDERMKSTSEILRNMRTLKLQAWDTQFGERIETLRKNEYHWLMKSLRQAALSAFIFWGSPTFISVITFWACMFMGIELTAARVLSAFATFRMLQSPIFSLPDLLNVIAQGKVSVDRIASYLKEEEIQHDVIEYVAKDRTETDIVIDKGRFSWDPDSRSPTIDEIDLKVKRGMKVAICGSVGSGKSSLLSGILGEIYKQSGTVKISGTKAYVPQSPWILTGNIRENITFGKEYDHDKYEKTVEACALKKDFDLFSGGDLTGIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTHLFKECLMGILKEKTVLFVTHQVEFLPAADLILVMKNGKIAQAGKYAELLKQNIGFEVLVGAHNVALESVLMVEKSTRTALAERESSINSSSSIKPVHIQQDSAQDSPPDSKGNDGKLVQDEERERGSISKEVYWSYMTTFKGGIMAPVIVLAQTSFQILQIASNYWMAWVCPTTTDAKPLFEMNFILLVYMALSIAGSLCVLLRAMLIASVGLETAQTLFTNLLRNVLRAPMSFFDSTPTGRILNRASSDQSVLDLEMATKLGWCAFSVIEIIGTIAVMSQVAWEVFVIFIPVTGICIWYQRYYTPTARELARLAQIRISPILHHFSESLAGTASIRAFDQESRFVYTNLGLVDGHSKPWFHNVSAMEWLSFRLNLLSNFVFTFSLVLLVILPEGIIDPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERVLQYSSIPHEAPLVIEDSRPPRNWPETGTICLKNLEVRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQALFRIVEPREGSIIIDNVDICKIGLHDLRTRLSIIPQDPSLFEGTVRGNLDPLQQYSDNEVWKALDKCQLGDIVRDKKQKLESQVVENGENWSAGQRQLFCLGRALLKRSSILVLDEATASVDSATDGMIQKIISQEFEDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFFKLIKEYSRRSHSFNNME* 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0072 1506 Pfam ABC transporter 651 784 IPR003439 GO:0005524
Lan12g0072 1506 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Lan12g0072 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 632 855 IPR003439 GO:0005524
Lan12g0072 1506 Gene3D ABC transporter type 1, transmembrane domain 291 618 IPR036640 GO:0005524|GO:0016021
Lan12g0072 1506 CDD ABCC_MRP_domain2 1257 1477 - -
Lan12g0072 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 320 598 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0072 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 82 1502 - -
Lan12g0072 1506 ProSitePatterns ABC transporters family signature. 757 771 IPR017871 GO:0005524
Lan12g0072 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 627 848 IPR027417 -
Lan12g0072 1506 CDD ABC_6TM_ABCC_D2 942 1234 IPR044726 GO:0140359
Lan12g0072 1506 SUPERFAMILY ABC transporter transmembrane region 942 1239 IPR036640 GO:0005524|GO:0016021
Lan12g0072 1506 Pfam ABC transporter transmembrane region 319 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0072 1506 Pfam ABC transporter transmembrane region 951 1184 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0072 1506 Gene3D - 626 856 IPR027417 -
Lan12g0072 1506 CDD ABCC_MRP_domain1 632 832 - -
Lan12g0072 1506 MobiDBLite consensus disorder prediction 876 903 - -
Lan12g0072 1506 SMART AAA_5 1285 1477 IPR003593 -
Lan12g0072 1506 SMART AAA_5 659 832 IPR003593 -
Lan12g0072 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1222 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0072 1506 SUPERFAMILY ABC transporter transmembrane region 313 614 IPR036640 GO:0005524|GO:0016021
Lan12g0072 1506 MobiDBLite consensus disorder prediction 876 918 - -
Lan12g0072 1506 PANTHER - 82 1502 - -
Lan12g0072 1506 CDD ABC_6TM_ABCC_D1 320 606 IPR044746 GO:0140359
Lan12g0072 1506 Gene3D - 1242 1495 IPR027417 -
Lan12g0072 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1261 1493 IPR003439 GO:0005524
Lan12g0072 1506 Gene3D ABC transporter type 1, transmembrane domain 904 1240 IPR036640 GO:0005524|GO:0016021
Lan12g0072 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1487 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0072 Lan-Chr12 693250 706458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0072 639 908 Calmodulin-binding Proteins AT2G36910 30.450 3.05e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0072 - - gmx:100817486 2402.86