Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0055 ATGGTCCTGCGTAACCGGATTTTCGGTTCTTATACTATTGTTAATGTCTTGGTGCTGATTAGTTGTGGCATGACCTATGGGACTGAGAGTGACATCTTCTGCTTGAAAATGATCAAAGAATCGCTTCAAGATTCCGATAACATTTTGTACTCTTCTTGGAATTTCCACAACAGCACTGAAGGGTTTATCTGCAGATTTGATGGGGTTGAATGTTGGCACCCGGACGAAAACAGGGTCTTGAATCTCAAATTGTCGAATAAGGGACTCAAGGGACAGTTTCCTCGTGACATTCAAAATTGCTCGAGTTTAACAGGATTAGATCTTTCTTTTAACAAGCTCTCCGGAATCATTCCAGGAGATATATCTACTCTTATACAATACGTGACATCGCTCGATCTATCTTCAAATGAACTTTCTGGTCCAATACCTGAGAGTCTTGCGAATTGTACCTATCTTAACGACCTTAAACTTGACCAGAATCAACTCACTGGTCAAATTCCTGCACAGTTTGCCCTTCTCTCACGGCTTAAGATGTTTACAGTATCCAACAATCTTTTGACCGGGCAAGTCCCATCTTTTAGTAGTAATGTTAGTGTAAGTTATGCCAATAATCGAGGTCTATGTGGAGGTTCCTTCGGGGTTTGTCAGACCAAGCCTTCCAAGACTAATACTTCAGTTATAGTTGGAGCTGCTGTTGGTGGGGTCACTGTTGCGATATTAGGAGTTGGTGTTGCGTTGTTCTTCTACTTACGCCGTGTTGTTGTCAAAAAGGAAGAGGACCCGGAAGGAAACAAATGGGCAAGAAGTCTAAAGGGGACTAAAGCAATAAAGGTTTCTACTTTTGAGAAAGCGGTTTCGAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATGTCAATATCATTGGGTCAGGAAGAACAGGAACTATTTACAACGCTGTCCTTGATGATGGAACATCACTTATGGTTAAGAGATTGCAGGATTCTCGACACTCTGAGAAAGAATTTCGGTCTGAGATGGCTACTCTCGGGACTGTCAAACATCGTAACCTAGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAAGCTTTTGGTCTTTAAGAATATGCCAAACGGCAACCTCCATGATCAGCTACACCCCGCTGATGGTGAGTGCATCCTCGAGTGGCCGTTGAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGTTTTGCATGGCTTCATCATAGCTGCAATCCCCGTATTATTCACCGAAACATAAGCTCTAAGTGCATATTGTTGGACAAAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGATTGATGAACCCAATTGATACACATTTGAGTACCTTTGTAAATGGGGAGTTTGGGGATATCGGTTATGTTGCTCCCGAGTACGCAAGAACTTTGGTTGCTACTCCAAAAGGAGATGTTTATAGCTTCGGGACTGTGCTTCTTGAGTTGGTGACTGGTGAAAGGCCCAACACTGTGTCCAAAGCTCCAGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGCAGCTCGCAAGCAACACAGAGCTCCAGGATGCGATCGAAAAATCACTACTTGGCAACGGTGTTGATGACGAGCTTTTCCAATTTCTAAAGGTTGCTTGCAACTGTGTTTTGCCAACTCCGAAGGAGAGGCCGACAATGTTTGAAGTTTACCAGTTTTTAAGAGCTATTGGGGGTAGATATAATTTCACAACCGAGGATGAAATATTATCACCTACCGATGCTGGCTATGCTGATAACATGGATGTACTCATTGTAGCTCGAGAAGGAAATGATTAA 1839 0.4241 MVLRNRIFGSYTIVNVLVLISCGMTYGTESDIFCLKMIKESLQDSDNILYSSWNFHNSTEGFICRFDGVECWHPDENRVLNLKLSNKGLKGQFPRDIQNCSSLTGLDLSFNKLSGIIPGDISTLIQYVTSLDLSSNELSGPIPESLANCTYLNDLKLDQNQLTGQIPAQFALLSRLKMFTVSNNLLTGQVPSFSSNVSVSYANNRGLCGGSFGVCQTKPSKTNTSVIVGAAVGGVTVAILGVGVALFFYLRRVVVKKEEDPEGNKWARSLKGTKAIKVSTFEKAVSKMKLSDLMKATNNFSNVNIIGSGRTGTIYNAVLDDGTSLMVKRLQDSRHSEKEFRSEMATLGTVKHRNLVPLLGFCMAKKEKLLVFKNMPNGNLHDQLHPADGECILEWPLRLKIAIGAAKGFAWLHHSCNPRIIHRNISSKCILLDKDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDIGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPNTVSKAPETFKGNLVEWITQLASNTELQDAIEKSLLGNGVDDELFQFLKVACNCVLPTPKERPTMFEVYQFLRAIGGRYNFTTEDEILSPTDAGYADNMDVLIVAREGND* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0055 612 SUPERFAMILY Protein kinase-like (PK-like) 279 574 IPR011009 -
Lan12g0055 612 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Lan12g0055 612 Pfam Protein tyrosine and serine/threonine kinase 304 573 IPR001245 GO:0004672|GO:0006468
Lan12g0055 612 CDD STKc_IRAK 306 574 - -
Lan12g0055 612 PANTHER RECEPTOR-LIKE PROTEIN 55 8 589 - -
Lan12g0055 612 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lan12g0055 612 Gene3D Transferase(Phosphotransferase) domain 1 375 590 - -
Lan12g0055 612 PANTHER LRR RECEPTOR-LIKE KINASE 8 589 - -
Lan12g0055 612 ProSiteProfiles Protein kinase domain profile. 300 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0055 612 Pfam Leucine rich repeat 128 186 IPR001611 GO:0005515
Lan12g0055 612 Gene3D Phosphorylase Kinase; domain 1 261 373 - -
Lan12g0055 612 SUPERFAMILY L domain-like 29 198 - -
Lan12g0055 612 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0055 Lan-Chr12 503403 506541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0055 29 588 Receptor kinase-like Gene Family AT3G28450 46.303 7.31e-175 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lan12g0055 PK_Tyr_Ser-Thr 7.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0055 - - adu:107486093 894.419