Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0037 ATGAACTACCCCAAATATCTTCACATTTCAGCCAAAAAACTCATTAAATTAATGGGTTTTCTAAGTCAGAAAATTTACTTACCCATTTTTTGGGTCATATTTTTAAGCTTCTATATTTGTTTGAGCTCTTCAATTGATACTATTACATCATCCAAGTACATCAAAGACAATGAGACAATAACCTCAAACAACACTGAGTTCATCTTAGGATTCTTCAGCCCTGGAAATTCGTCGAATCGATATCTCGCAATCTGGTATCTTTTTCCATCAAACATTGTATGGATAGCTAATAGGGATCAACCTGTTAATGATTCATCAGGTGTTGCTAAGATTCATAAGGATGGAAATTTTGTGGTGATGAATGAACAAAACCTTATGATATGGTCAACAAATGTGACAAGTAATGATAATTATAGTAATTCAAGTGCTAAACTTGAAGATTCTGGAAATCTTGTGTTGTATGATGAATTCAGTGGAGAAACAATATGGGACAGTTTCACACATCCTGCTGATGCAGCTATGCCAGGAATGAAAATTGCAGCCAACCCCATTACAGGTAAGAAAATAGAGTATATATCATGGAAAAGTCCTTCAGATCCATCAACTGGTTACTTCACTGGTAGTCTTGAAAGATTGAATGCACCAGAAGTGTTTTTTTGGTATAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAATGTATTCCTTGGTTCACCAAGAATGTTAACTGATTATCTAGCTGGATGGAAATTTCATATTGAAGATGATGGAACTCAATATCTAACTTACAATTATGCAAATCCATTAAACTTTGGAATCCTTTCTGTAACACCACATGGAACACTTAAATTGGTGAGTTTTGTTAACAAAACAGAAGTTGCAAATATTGAAGTTGGTCAAAGTGAATGTGATATTTATGGAAAATGTGGTCCATTTGGAAACTGTGATAATTCTACTTCACCAATATGCAATTGTTTTAATGGGTTTGAGCCAAGGAATCAAGAGGAATGGAATAGAGAAAATTGGACTAGTGGTTGTGTTAGAAAAGTGGAATTGCAATGTTATAAGGTTAAGAATGGAAGTGAAGTAGAACAAGATGAATTTTTGGTATATCATAATATGAAAGTTCCAGATTTTACACAGTGGTCTGGTGCTTATCAAGATAAATGTAAAATAGATTGTTTGGCCAATTGTTCTTGCTTGGCTTATGCATATGATTCTGGTGTTGGATGCATGTATTGGATTGGAGACTTAATTGATTTACAGCATTTTTCATATGGAGGAATCGATCTCTACATGCGTACACCATATTCGTTAATCGGAAGAAGTAAAAAAGGATACAAGGTATTGATTGGTTCCATTATTGGGGCAATAGGAATAATTATCTTAGCAATATGTGCATATCTTTTGTGGCGAAAATGGACTGCTAAACAAACAGGGTTTATAATTGACAATACAGGAAAAGGGCCTCAAAATACTAGTATTGAAGACCAAAATCAAATGAAATTGGAAGAGCTTCCTCTATTTGATTTTGAAAGTGTTGCAGTAGCTACAAACAATTTTCACTTAGCTAATATGCTTGGGAAAGGAGGTTTTGGTCCAGTATACAAAGGACTATTGGAAAATGGCCAAGAAATTGCAGTTAAAAGACTCTCAAAAGCATCAACACAAGGTTTAGAAGAATTCATGAATGAAGTGGTGGTCATTTCAAAGCTCCAACATCGAAATCTTGTAAGAATTCTTGGATGTTGTATTGAACGAGATGAACAAATGTTGATCTATGAGTTCATGCCAAATAAAAGCTTGGATGCATTTATCTTTGATCCAATCCAAAAGAAAGTTTTAAAATGGAAAAAGCGCTTCAACATAATTGAAGGAATAGCTCGAGGTATACTTTATCTTCATAGAGATTCAAGACTACGAATCATACATAGAGATCTTAAGGCAAGCAATATCTTATTGGATGATGAGATGAATCCAAAAATATCAGACTTTGGTTTAGCTAGAATTTTCAAAGGCGATGAAGATTCTGAAGTTAATACAAGAAGAGTTGTTGGAACATATGGTTATATGCCACCCGAATATGCAATGGAAGGGCTATTCTCAGAAAAATCAGATGTCTATAGTTTTGGAGTTTTGTTGTTAGAGATTGTTAGTGGACGAAGAAACACTAGCTTTTATAATGATGAGCAACCATTAGGCCTAGTCGGATTGACATGGAATCTATGGAATGAAGACAATATGATGCCTATAATAGATGAAGAGGTATGGGATCCATGTTTTGAGAATAGTATTTTGAGGTGCATACACATAGGACTTCTATGTGTGCAAGAAGTTGCAAAAGATAGACCAACTATATCCACTGTAGTTTTGATGCTAATAAGTGAAATTACACATCTACCCTCTCCAAGAAAGGTTGCATTTGTTCAAAAACAAAAATATTCAAGTTCAACATCCTCTCAAAAAAGTCAAGCTAGCTCCAACAACAATGTAACTATTAGTGAAATCCAAGGCAGGTAA 2529 0.3448 MNYPKYLHISAKKLIKLMGFLSQKIYLPIFWVIFLSFYICLSSSIDTITSSKYIKDNETITSNNTEFILGFFSPGNSSNRYLAIWYLFPSNIVWIANRDQPVNDSSGVAKIHKDGNFVVMNEQNLMIWSTNVTSNDNYSNSSAKLEDSGNLVLYDEFSGETIWDSFTHPADAAMPGMKIAANPITGKKIEYISWKSPSDPSTGYFTGSLERLNAPEVFFWYNKTKPYWRTGPWNGNVFLGSPRMLTDYLAGWKFHIEDDGTQYLTYNYANPLNFGILSVTPHGTLKLVSFVNKTEVANIEVGQSECDIYGKCGPFGNCDNSTSPICNCFNGFEPRNQEEWNRENWTSGCVRKVELQCYKVKNGSEVEQDEFLVYHNMKVPDFTQWSGAYQDKCKIDCLANCSCLAYAYDSGVGCMYWIGDLIDLQHFSYGGIDLYMRTPYSLIGRSKKGYKVLIGSIIGAIGIIILAICAYLLWRKWTAKQTGFIIDNTGKGPQNTSIEDQNQMKLEELPLFDFESVAVATNNFHLANMLGKGGFGPVYKGLLENGQEIAVKRLSKASTQGLEEFMNEVVVISKLQHRNLVRILGCCIERDEQMLIYEFMPNKSLDAFIFDPIQKKVLKWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDEMNPKISDFGLARIFKGDEDSEVNTRRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFYNDEQPLGLVGLTWNLWNEDNMMPIIDEEVWDPCFENSILRCIHIGLLCVQEVAKDRPTISTVVLMLISEITHLPSPRKVAFVQKQKYSSSTSSQKSQASSNNNVTISEIQGR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0037 842 Pfam S-locus glycoprotein domain 228 335 IPR000858 GO:0048544
Lan12g0037 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 841 - -
Lan12g0037 842 PIRSF SRK 18 842 IPR024171 GO:0004674
Lan12g0037 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 200 IPR036426 -
Lan12g0037 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 36 841 - -
Lan12g0037 842 SMART ntp_6 366 438 IPR003609 -
Lan12g0037 842 CDD PAN_AP_plant 353 439 - -
Lan12g0037 842 Gene3D - 40 168 IPR036426 -
Lan12g0037 842 ProSiteProfiles Bulb-type lectin domain profile. 45 166 IPR001480 -
Lan12g0037 842 ProSiteProfiles PAN/Apple domain profile. 357 439 IPR003609 -
Lan12g0037 842 SMART serkin_6 524 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0037 842 CDD STKc_IRAK 530 796 - -
Lan12g0037 842 SMART blect_4 51 169 IPR001480 -
Lan12g0037 842 MobiDBLite consensus disorder prediction 819 842 - -
Lan12g0037 842 CDD B_lectin 53 169 IPR001480 -
Lan12g0037 842 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672|GO:0006468
Lan12g0037 842 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0037 842 Gene3D Phosphorylase Kinase; domain 1 498 599 - -
Lan12g0037 842 Pfam D-mannose binding lectin 92 195 IPR001480 -
Lan12g0037 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Lan12g0037 842 SUPERFAMILY Protein kinase-like (PK-like) 509 823 IPR011009 -
Lan12g0037 842 Pfam PAN-like domain 367 424 IPR003609 -
Lan12g0037 842 Gene3D Transferase(Phosphotransferase) domain 1 600 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0037 Lan-Chr12 312013 316885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0037 512 842 Receptor kinase-like Gene Family AT4G11480 56.012 3.85e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan12g0037 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0037 - - gmx:100786846 1216.45