Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0023 ATGGCCACTCCTTCTTCACCAAAACCCACTCCCCTAAACGACACCGTTTCACCCACAAAGAAACCCCAACCCATCCCCTGGACCCACCAAGAGACCCTGAACCTCATCAGGGCGTACCAAGAGAAATGGTACGCCCTGAAGCGGGGCCCACTCCGCTCCAGCCAATGGGAAGAGGTGGCTGTAGTCGTAGCCGCTCGATGCGGCTACGACTTCAACCACCCTTCCAAGTCTGCCATCCAGTGCCGCCACAAGATGGAGAAGCTTCGACAGCGTCATCGCGCTGAGAAGCACCGCCTTCTTGGAGGTGGATTACAGCAGCCACGTGGATGGCTGTATTTTGGACTTATGGATGAGCTGGAGCGTGGGCCGATGCCTATTTCGGCTCGGCCCCTAACCGCTCTCAGTCCTCCTCGTAATTATGATGATGATGATAATGATAGTGACAACGACAACAAAGAAGATAATTACTTTGCTGATGATGATGATAAGATGATGAGTTATGTGAAGTCGAAGAGTATCAATTACATTCTTAATGAGAGGCCAAGAACAACAAAGAAATATGGAGTTGATTTAGGGTTTTCGAGGGAGCATGTTGTTCCGAAAGGTTTTCGGAGAATGGATTACAATGACGAGAATTATGATGATGATGATGATGATGATGATGATGATAAGATGATGAGTTATGTGAAGTCGAAGAGTATCAATTACATTCTTAATGAGAGGCCAAGAACAACAAAGAAATATGGAGTTGATTTAGGGTTTTCGAGGGAGCATGTTGTTCCGAAAGGTTTTCGGAGAATGGATTACAATGACGAGAATTATGATGATGATGATGATGATAGTGATGATGAGAACAATGAGGATGAGGAGAAAAGAGTGGTGGCGAATAAGGAAGGGTTGATTTTGGGGTTAACTGAAGAGATAAAAGACTTTGGTGAGAGGTTTATTGCAATGGAGAATTTGAAGATGAGGATGATGAAGGATACTGAGAGGTATAGGGTGGAGATGGAGAATAAGCGGATTGAGATGATCCTCAAATCGCAGCAAAGAATTGTCGATTCGATCGGGAGAGCATTCGGGTTGTCTAACAAGAAGATGAAGATTGTTCATGAAATATGA 1119 0.4495 MATPSSPKPTPLNDTVSPTKKPQPIPWTHQETLNLIRAYQEKWYALKRGPLRSSQWEEVAVVVAARCGYDFNHPSKSAIQCRHKMEKLRQRHRAEKHRLLGGGLQQPRGWLYFGLMDELERGPMPISARPLTALSPPRNYDDDDNDSDNDNKEDNYFADDDDKMMSYVKSKSINYILNERPRTTKKYGVDLGFSREHVVPKGFRRMDYNDENYDDDDDDDDDDKMMSYVKSKSINYILNERPRTTKKYGVDLGFSREHVVPKGFRRMDYNDENYDDDDDDSDDENNEDEEKRVVANKEGLILGLTEEIKDFGERFIAMENLKMRMMKDTERYRVEMENKRIEMILKSQQRIVDSIGRAFGLSNKKMKIVHEI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0023 372 MobiDBLite consensus disorder prediction 265 291 - -
Lan12g0023 372 ProSiteProfiles Myb-like domain profile. 26 89 IPR001005 -
Lan12g0023 372 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 207 367 IPR044823 -
Lan12g0023 372 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 185 IPR044823 -
Lan12g0023 372 MobiDBLite consensus disorder prediction 1 26 - -
Lan12g0023 372 Pfam Myb/SANT-like DNA-binding domain 26 119 IPR044822 -
Lan12g0023 372 MobiDBLite consensus disorder prediction 272 287 - -
Lan12g0023 372 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 185 - -
Lan12g0023 372 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 207 367 - -
Lan12g0023 372 MobiDBLite consensus disorder prediction 127 158 - -
Lan12g0023 372 Gene3D - 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0023 Lan-Chr12 202514 214017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0023 27 119 Trihelix Transcription Factor Family AT3G14180 32.258 1.21e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan12g0023 Myb_DNA-bind_4 5.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0023 - - lang:109362413 670.233