Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0012 ATGGCAGTGAATAAAGCAGGAAACCTCTTAGGTACCAATACTGAGAAGGATCATTGTTTGTTTCGTAATGATGGAATTGCGTGTAGAAGAGTTCCTGTTTCACCTGAGATATTTGGAAAGCATGAAGATAGGTTTGGGTTGAATAGGGAGAATGGACACATCAAGTATGAAGGTCTTACAAAAATTTTGGGGTTGAGGAGAATGGAATCTGAGAGTTCTGAGATAAGCGACTTTATTTCTATGAAAGAGCCGACCCAGGAGATGGAAAATGGGGCTTTTGTAAATAGTCTAAACAAAAGCAATAAAGAAGCTGGTGTTTCCCATTCCTCAAAGAAAGCCGTTGATGAGTCTATTGGTGACATATCTGGTCATGGGCCAATTGTGTCCCCCCGTGTGCAATATGAATATGAATCTACTTATTCGAATGATCATTCTGGTTCAGGAGTTGTAGATGAATCTCGATCTGAGAAAATGAAGTTTCTATGCAGCTTTGGTGGGAAAATATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTCGGAGGACAGACTCGAATGATATCAATCCGAAAGGGTATCTCATGGGAAGCACTTATCAAGAAGTCTTTGGGTTTTTGCAGCCAGCCTCATACAATCAAATATCAACTTCCGGGGGAGGATCTTGATGCTCTAATATCTGTCTCCTCTGACGAGGATCTTCAAAATATGATAGAGGAATACCACGGGCTTGAAAGACATGAAGGATCTCATAGGCTTAGAATTTTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCTTCATTTGAGGCAAGCAGCGTTCAGCAGAGTGATGCTGGCTACCGGTATGTTGTTGCTGTGAATGGCATAGCCGATCCTACTCCTGGGAAAAGCATTGGAGGGCAGTGTTTGACAAATGAGGCAAGTCAGTTGGATACAAGTTTGAATCTTGCTCCTTCTCCCAATTCCCCTTATACTTCGGATGCCAAGAGTGGTGGTGGTAATGCTTTAAATTCAGATGGAACTTTTAATGGTTCGCTGATTCTTCACGGATCTCCCAATCAATCTCCACTAGTTTCCCCAATTCCAATCGAGGGAAGAGGTTCAAGCATCGGTTATACACAGTTGCTTTGTAATAATTCATGCCAAGGAAGTATTGAGAGCAATACATCATTTATCACAGCTCAGCTACAACCAGAGAGCTCCAGCATAAGCACTGCTGATTATAGATACCCTCAACAAGTACCTGTGACTTTGTTAAGTGACAGTCTCTGTAATCAACATGATGATGTTGTTAAGCCAGAGAAGCACTATGGAAAGCATTTTCGTAACAGCAATCCCGACAAGGAATCAGTGACTCCTTTATATATTAATCCAAGTGAGGGCTATAGTGATGGACTTTTTGGTAAAAAGCCCTTGCATAAGGAAAGAACATTCCACTCTGGAAATCCTCCTTCATGTTTGGATGATCTAATCTGTCAACAGGCTGAATCTGATGGTATTACTTACATCCCTTTTGTAATGCCTCATGCTTTTTCGGATTCGCAGTTGCATGAGAGTGAAACTAGATCTGGTTACTGCTCACAAGAAGCAACTGGCTTATCTTTCTCCTTGAACCATGCAAAGGCTCAGTCATCTTCAATGTTATTGTCTAGTGTCTCACAAGGGGGGCTTATGGAGGTACATAATGATTCCATTCTCCTTTATCCTCAGATACAAAGTATGCTAACAAATAATACCGAGTCATCCGAGTTGCACAAAAGGCAGGATGTTGCATCATCTTCTCCATATTCAGAGTCATTAGGAGTGAATGATCCTGTTCATAGGGATAGCATTTTAATTGGAAAAAAGTACCCTGTTGCTCAAACTAATCTAAGTGGATCTAGCTTTGTAGTGAAGCATGCTGAGGACAATTCTTTGACTTCAGAAATGATTAAGAGAACTGAAGAAAAGAATCCTACTGAAATGAAGGATAGCATGATTTACGTGGGCAAAACACCTGGTGCTAATAGGGTTCTTGTCACTGAATTGAATCTTTTGGACTCCTTCCCATCTAATAATTTGAATGCCAAGGTTAATATGCAAAATGTTTGGGAGCTACCTCCCGAGGATAGCATTGCTGTATCATTAGGCACAGTAGGAGTCGGCAACAATAATCACATGGACAAAATCCCTTCTCATTTTGACCCTAGCCAAAGGACTGGTGATAGTAAGAAATGTGCTGTGAATGAAGGTTTGAATGGTGAACAAGGTACTGGGTTTTCGTTGGCAAGAAACTCTGATTTAAATGGCCCAACTTTCAAAGGTGGAGAAACCACTCGTGACAAAATTTCTCTTGACGATATGTTTGAACTATCCATTGACTTAGATTCTTATAAAGCTTCACAAGTTCAACCTTCCATGAACCCGAAGAGTACAAGTCTTCTTGAAAATCCAACTTTAAGCTCTGCATCTTTGTATGATGCTGTACTTTATGATGGTCATGGTCCAAGTTCAAACTTGCCTATGAATCACCAGCCCAGTCCAAAGAAGAATACTTCTTTTAAGAAAATCCCTTCCTTGATTGATCATGACTCGATAACCAGTTCTGAACAGATAATAGTTGATCAGGTTACCAGGGGACATTTTGCTGAAAAGTCAAAAGTTAGCGATGTCATGTCGGAGCAATCAAGAAGACCAGAAAAGTGCAATGATGTAAATCAAGTGGAGGCATTTGTTGTAGTAGAAGAAGTGATTGGTGTAGTTCCTCCGGACATTTATTCTTCATTGGCAACCACCCAAAATATTGTGGATGAAATTGGAAGTCGTGTTGTATCCTTGTCTCCCATGGAGGAAGAGAGCAACATCCTACAGTCTGAAAATGAGGATTTTAAAGACGATGAATCAGACAGGAATGAATTCCTTACTGATGCAATGATAGCAGAAATGGAAGCAAGCATCTATGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGAACTTCAGGAGTTAGGCTCTGGTACTTATGGAACGGTTTATCATGGAAAATGGCGGGGATCAGACATTGCTATTAAGAGAATTAAAAAGAGCTGCTTTGCAGGGAGATATTCTGAGCAAGAAAGATTGACAAAAGACTTTTGGAGAGAGGCGCAAATCCTTTCGAATCTTCACCATCCTAATGTGGTTGCATTTTATGGGATAGTACCAGATGGATCTGAAGGAACCCTGGCGACCGTAACTGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTCGTCAAGAAAGATAGATTACTAGATCGTCGTAAAAAGCTAATAATTGCCATGGACGCATCTTTTGGTATGGAATATTTGCATTCGAAAAATATTGTCCATTTTGATTTGAAGTGTGACAATTTGCTAGTCAATCTAAGGGATCCACAACGGCCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTGGTATCTGGTGGTGTTCGTGGAACTCTTCCATGGATGGCACCGGAGCTGTTGAATGGTAGTAGCAGCAGAGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCCATTATTGGGGGGATTGTAAAGAACACTCTTCGACCACCTATTCCGGAACATTGTGATACTGAATGGAGGAAGCTCATGGAAGAGTGTTGGTCACCTAATCCCGAAAGCCGACCATCATTCACAGAGATAACACGGAGGTTACGATCTATGTTTATGACCCTTCAAGCAAAGGGTTGTCAGGCATGTCAGTTAAGGCCTAGTGCTTCATCAGGGTTAGCATAA 3840 0.4104 MAVNKAGNLLGTNTEKDHCLFRNDGIACRRVPVSPEIFGKHEDRFGLNRENGHIKYEGLTKILGLRRMESESSEISDFISMKEPTQEMENGAFVNSLNKSNKEAGVSHSSKKAVDESIGDISGHGPIVSPRVQYEYESTYSNDHSGSGVVDESRSEKMKFLCSFGGKILPRPSDGKLRYVGGQTRMISIRKGISWEALIKKSLGFCSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLERHEGSHRLRIFLVPLGESEETSSFEASSVQQSDAGYRYVVAVNGIADPTPGKSIGGQCLTNEASQLDTSLNLAPSPNSPYTSDAKSGGGNALNSDGTFNGSLILHGSPNQSPLVSPIPIEGRGSSIGYTQLLCNNSCQGSIESNTSFITAQLQPESSSISTADYRYPQQVPVTLLSDSLCNQHDDVVKPEKHYGKHFRNSNPDKESVTPLYINPSEGYSDGLFGKKPLHKERTFHSGNPPSCLDDLICQQAESDGITYIPFVMPHAFSDSQLHESETRSGYCSQEATGLSFSLNHAKAQSSSMLLSSVSQGGLMEVHNDSILLYPQIQSMLTNNTESSELHKRQDVASSSPYSESLGVNDPVHRDSILIGKKYPVAQTNLSGSSFVVKHAEDNSLTSEMIKRTEEKNPTEMKDSMIYVGKTPGANRVLVTELNLLDSFPSNNLNAKVNMQNVWELPPEDSIAVSLGTVGVGNNNHMDKIPSHFDPSQRTGDSKKCAVNEGLNGEQGTGFSLARNSDLNGPTFKGGETTRDKISLDDMFELSIDLDSYKASQVQPSMNPKSTSLLENPTLSSASLYDAVLYDGHGPSSNLPMNHQPSPKKNTSFKKIPSLIDHDSITSSEQIIVDQVTRGHFAEKSKVSDVMSEQSRRPEKCNDVNQVEAFVVVEEVIGVVPPDIYSSLATTQNIVDEIGSRVVSLSPMEEESNILQSENEDFKDDESDRNEFLTDAMIAEMEASIYGLQIIRNADLEELQELGSGTYGTVYHGKWRGSDIAIKRIKKSCFAGRYSEQERLTKDFWREAQILSNLHHPNVVAFYGIVPDGSEGTLATVTEYMVNGSLRHVLVKKDRLLDRRKKLIIAMDASFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPEHCDTEWRKLMEECWSPNPESRPSFTEITRRLRSMFMTLQAKGCQACQLRPSASSGLA* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0012 1279 CDD STKc_MAP3K-like 996 1253 - -
Lan12g0012 1279 ProSitePatterns Protein kinases ATP-binding region signature. 996 1021 IPR017441 GO:0005524
Lan12g0012 1279 SUPERFAMILY Protein kinase-like (PK-like) 978 1252 IPR011009 -
Lan12g0012 1279 MobiDBLite consensus disorder prediction 313 335 - -
Lan12g0012 1279 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 78 1265 - -
Lan12g0012 1279 MobiDBLite consensus disorder prediction 747 766 - -
Lan12g0012 1279 MobiDBLite consensus disorder prediction 741 772 - -
Lan12g0012 1279 Pfam PB1 domain 174 258 IPR000270 GO:0005515
Lan12g0012 1279 Pfam Protein tyrosine and serine/threonine kinase 992 1253 IPR001245 GO:0004672|GO:0006468
Lan12g0012 1279 SUPERFAMILY CAD & PB1 domains 173 262 - -
Lan12g0012 1279 Gene3D Transferase(Phosphotransferase) domain 1 1078 1272 - -
Lan12g0012 1279 ProSiteProfiles Protein kinase domain profile. 990 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0012 1279 PRINTS Tyrosine kinase catalytic domain signature 1109 1127 IPR001245 GO:0004672|GO:0006468
Lan12g0012 1279 PRINTS Tyrosine kinase catalytic domain signature 1180 1202 IPR001245 GO:0004672|GO:0006468
Lan12g0012 1279 PRINTS Tyrosine kinase catalytic domain signature 1224 1246 IPR001245 GO:0004672|GO:0006468
Lan12g0012 1279 PRINTS Tyrosine kinase catalytic domain signature 1072 1085 IPR001245 GO:0004672|GO:0006468
Lan12g0012 1279 SMART PB1_new 172 259 IPR000270 GO:0005515
Lan12g0012 1279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1115 1127 IPR008271 GO:0004672|GO:0006468
Lan12g0012 1279 Gene3D Phosphorylase Kinase; domain 1 983 1077 - -
Lan12g0012 1279 Gene3D - 176 258 - -
Lan12g0012 1279 MobiDBLite consensus disorder prediction 579 602 - -
Lan12g0012 1279 SMART serkin_6 990 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0012 1279 CDD PB1_UP2 161 256 - -
Lan12g0012 1279 PANTHER SERINE-THREONINE PROTEIN KINASE 78 1265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0012 Lan-Chr12 105214 116198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0012 155 289 MAP Kinase Kinase Kinase AT1G16270 54.815 8.23e-37 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lan12g0012 PK_Tyr_Ser-Thr 9.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0012 - - gmx:100809991 1444.87