Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0007 ATGAAACCAACATCTGTTAAGAGTTTGGATCCAATGAACATGAAGAAGGAGATTCTATTAACATATATGCAAGACCCGGTTTGTCCTATGGCCTATCACTTCAATAAACAAGAGGCTTTGACATTGACTAGGTCTGTGTCATTTCCTTTACCTCATTCATCTAAGGCTTCCATATCCATGAAAAATATATCAGGCAATGGTTCTCTACCGAAAGTGGTAGGAAGATTACACTTTTGCAATAAAACACAAAAGGGTGCTCTATTTGAATGGAGATTACATGGAAATCTAGATATGAATGATGGAATGATTGTAAGAGATGTTCAATCTTCAGGATCTGCTAAGGGTCGGAATCAGAAGGGAATGAAAAAAATTAAGAATCTCAAACAGAAAATAGTGCCTATAACGGGAGAGAATGAGAATGAGAATGAGAATGAGAAGGAGAAAGAGAAAGAAAAGCTTCGTGTTACTCTTGATTCTGTGATTGATAAAATTCCTCAAGGCCATGGGATTTCAGATGATTTGAAGAAGGAAATTCTAAAGAAACTGATAGATCCTATTGCTTCTACAAAAGTTGAAAACCGTTGCGCAAGTTTTAATGGGAGGACTAGGACTCATTCCTTTACTAAGCACCCAATAAGAAGAACCTCCTCTCTTGAAGAACCACTAGATACTTATTCCCATCTCTTTCAGCAACTAAATTTAACAACAAAAGAAGCAACTTCACCATTGATCGTGCCGAAACCCATTAAAAGAATTCTTTCATTACCTGATCTCCAATCCTTTTACTATTCTTATCCTAATGGGGACTTTTCTCATGTCCTATCTCTTACTAAACCAATCCTTACTTCTATGGATGGAACTATGGGTTCGGAAAGTATCGGTTATCCGAAAAGGAGGGTTGGCCTTAATGTAGGTGTAGGTGAAAATGATGCATTGATTAGTACTAACATTGAAGGATCAAGATCAGATTCTATAAGTGAGATTAATAGCAAGGTGGGCGTGATAATTGACGATTTTGGAGACAGTATTTTGAAAAATGGTGGCACTTTTAATGACCAAGATGTAGGACTAAAATATGAAGACAAGACTGCACTAGCAGCATCAGATTCAAAATCAAAGTCTGGACCCATTGACAGATTGGAAAATGTGGTTGAACAAGAGGCTAACAAAGTGAGTGAGATTCTGAAGAAGCACTTAAACTATGAGATTCCTCAATTTCATGTGGACACAAGATACAAAGCTGAGTTTAATTATGTGAAATATGTACTTGAGATATCAGGACTAACAAGTAATGAATCAATCTCAGCATGGCATTCTAGTGAACAACCACTTGATCCATTACTTTATGAAGAAATGGAAAGTGACCCTGATTTCTGTAGCTATGAACATAGCAACAATTGTAATCACCATGTGTTGTTTGATTTAATTAATGAATCATTGTTGGAAATTTATGGAAGTTGTTGCTGCTACTATCCAAAACAATTATCATATCTTTCATACATTCATCCAATGCCAAAAGGGAATCACATTCTCCATGAAGTGTGGAATCATATGAGCCAGTCATTGAACTTGAAATCCAAGTCTAACCAAACCACAGATTTTCATGTAAGTAGAGATCTAGCAAAGAATGATGGGTGGATGAATCTTCAGTTATCTGCTGAGCTTGTAGGTTTGGAAGTTGAAGACTTGGTTTTTCATGATCTCATGGAGGATATTATGAGGGACTTAAGGTAG 1734 0.3651 MKPTSVKSLDPMNMKKEILLTYMQDPVCPMAYHFNKQEALTLTRSVSFPLPHSSKASISMKNISGNGSLPKVVGRLHFCNKTQKGALFEWRLHGNLDMNDGMIVRDVQSSGSAKGRNQKGMKKIKNLKQKIVPITGENENENENEKEKEKEKLRVTLDSVIDKIPQGHGISDDLKKEILKKLIDPIASTKVENRCASFNGRTRTHSFTKHPIRRTSSLEEPLDTYSHLFQQLNLTTKEATSPLIVPKPIKRILSLPDLQSFYYSYPNGDFSHVLSLTKPILTSMDGTMGSESIGYPKRRVGLNVGVGENDALISTNIEGSRSDSISEINSKVGVIIDDFGDSILKNGGTFNDQDVGLKYEDKTALAASDSKSKSGPIDRLENVVEQEANKVSEILKKHLNYEIPQFHVDTRYKAEFNYVKYVLEISGLTSNESISAWHSSEQPLDPLLYEEMESDPDFCSYEHSNNCNHHVLFDLINESLLEIYGSCCCYYPKQLSYLSYIHPMPKGNHILHEVWNHMSQSLNLKSKSNQTTDFHVSRDLAKNDGWMNLQLSAELVGLEVEDLVFHDLMEDIMRDLR* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0007 577 Coils Coil 377 397 - -
Lan12g0007 577 PANTHER PROTEIN TRM32 157 304 IPR044257 -
Lan12g0007 577 PANTHER PROTEIN TRM32 304 576 IPR044257 -
Lan12g0007 577 PANTHER DUF4378 DOMAIN PROTEIN 304 576 - -
Lan12g0007 577 PANTHER DUF4378 DOMAIN PROTEIN 157 304 - -
Lan12g0007 577 Pfam Domain of unknown function (DUF4378) 415 571 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0007 Lan-Chr12 63891 66020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0007 8 565 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 31.667 2.58e-63 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0007 - - lja:Lj0g3v0182349.1 480.715