Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1925 ATGGCTACCATTCCTTCTCTTCTACACTCAACGCTATCCATTCACTTTCCTTTCTCTCATTCTCCATTTTCTTCTCCTTCACTCAACAACCATGCCACTGTCTTGTTTCCTGTGAAGGCTTCTGGTGCTGCTGTTTTGGTTGAGAAATCTGAGGCTGAAAATGTCAATAGGCTCAAAACCACTTACACTCAGAAAATCATTCCCTTGCTCATGGAAGAGTTCTCATACACCAACAAACACCAGGTGCCTAAAATCGAGAAGATTGTGGTTAACTGCGGTATTGGAGAAGCTGCACAAAATGCAAAGGGTTTAGAAGCAGCAATGAATGATCTAGCTAAAATCACAGGGCAGAGACCTATTAAAACCCGGGCCAGGGCCTCTGTTGCAACCTTCAAGATCAGGGAAGGCCAACCACTTGGAATTGCTGCGACACTCAGAGGAAGTACAATGTACTCATTCCTAGACAGAGTTGTGAACTTGGGACTTCCCAGGACAAGAGATTTCCAAGGTGTAAACCCCAACAGCTTTGATGGTCATGGGAATTATAGCATCGGCGTTAAGGATCAGAGTGTGTTCCCGGAGATCAGATATGATGCTGTTGGTAAGCCTAGGGGAATGGATATCTGCATCGTGACAACAGCTAACACCGATCAAGAATCACAGAGATTATTGGCTCTTATGGGCATGCCTTTTAGGGAGGGAGGTGGTTCAGCCATAACAGTTCGCAAAAAGAAGCTGAAATCTCATCATTTTGATGCAAAATCAAAGGGAAAAGGAGTAAGGAAGTAA 789 0.4436 MATIPSLLHSTLSIHFPFSHSPFSSPSLNNHATVLFPVKASGAAVLVEKSEAENVNRLKTTYTQKIIPLLMEEFSYTNKHQVPKIEKIVVNCGIGEAAQNAKGLEAAMNDLAKITGQRPIKTRARASVATFKIREGQPLGIAATLRGSTMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGVKDQSVFPEIRYDAVGKPRGMDICIVTTANTDQESQRLLALMGMPFREGGGSAITVRKKKLKSHHFDAKSKGKGVRK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1925 262 ProSitePatterns Plant hemoglobins signature. 25 36 IPR019824 GO:0019825|GO:0020037
Lan11g1925 262 ProSitePatterns Ribosomal protein L5 signature. 111 127 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lan11g1925 262 Hamap 50S ribosomal protein L5 [rplE]. 55 233 IPR020930 GO:0003735|GO:0005840|GO:0006412
Lan11g1925 262 Pfam ribosomal L5P family C-terminus 138 231 IPR031309 -
Lan11g1925 262 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 51 233 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lan11g1925 262 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 51 233 - -
Lan11g1925 262 Gene3D - 49 233 IPR022803 -
Lan11g1925 262 SUPERFAMILY RL5-like 57 232 IPR022803 -
Lan11g1925 262 Pfam Ribosomal protein L5 78 134 IPR031310 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1925 84 211 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.344 3.01e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1925 K02931 - gmx:100818896 404.445