Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1924 ATGAACATGGTTATGGTGAATCCTGAACCTCTCTATGTTGCTGTATCAAAAGATTTGAAGGAAAACAAATTAAATCTGATATGGGCAATACAGAATTCAGGAACAAAAAGGATTTGTATCCTTCATGTTCATGTTCCACCAACACTGATTCCCTTCAGTTCATTGAAAGAGCAAGAAGATCGAGCATACCAGGAATTTGAAAGGCAAAACATGCATAAGACTCTAGATGACTATCTTCTTATCTGTCAAAGGATGGGGGTTCAAGCAGAGAAACTGCATATTGAAATGGACAGCATTGAAAAAGGAATTTTAGAACTCATCTCACAGTACAATATTCAAATGCTTGTTATGGGAGCAGCATCTGATAAGAATTATTCTAGGAGAATGATGGACCTCAGATCTAAGAAAGCCATCTATGTATGTGAACAAGCACCAGCTTCTTGTCATCTTTGGTTTATCTGCAAAGGGCACCTTATACAGACAAGGGAGCACAGTTTGGATGAAGGTAATGTAGAGGCTGCATCTCCTCTGGTGCAGAAAGTGCCAAACTCTGAAGCTGAGCATTCTCTACACTTAAGATCTCATTCTCATGCCCTGGTACAAAATCATGGGGCAAATCTAACAAATCCTGGTCAAGAATTATTTCGGAGAGTAAAGTCCGCTAATGATGGACATGGAGGGAGTATTTTGGATGTTTCTTTTCAAGATGACACTGAAGGGTATTCAAGTCCATGTAACCAGATGGGTGTAGAAGTATGTCGCGATGAGTCAAATGGGCTGTCAAAGAGGAGTCCTTCAGGTTTGTCAACATGCCCCGGCAGCACTGCAGTAGAACCAGCATTGACCCCAAACTTGATTACTGAGCAGGGTGGTCGAATGAATGATACTCTGTATGATCAACATGAACAACCTAAGGGTGAGGCTGAGAATGCTACGCGAAATGCATATCGAGAAACTTTCAGACGTGAGAAAGCCGAAAAAGATTTTATGGATACTATACACATGGCTAAAGCCTCTGGAAGCTTATATTTAGATGAATTGGACCTGAGGAAATTGGCCGAGGAAGAACTGGCTAAAGAAATAGAAGAACTCGATAATATAAAAAGCCAGAGAGACAAGGTTAAGGAAGAACTCCAACTTGCCCACAATCAGAAGTCATCACTAGAGAGTCAAATTTCATCATCTGAACTTATGATAAAGGAGTTGGAGCAGAAGATTATTTCTGCTGTCGATCTGTTACAAAGCTACAAGAATGACCGAGATGAGTTGCAGATACAGCGCGATAGTGCATTGAGAGAGGCTGAAGAGTTGAGGGGAAAACGAGGAGAGACCCTAAGAATGCATGTGTCTCAACTGTTCTCAGAGTTCTCTTTTTCAGAGATTGAAGAAGCAACAAGTAACTTCAACCCATCCCTAAAAATTGGAGAAGGAGGATATGGAAGCATATTTAAAGGAATCCTGCATCATACAGAGGTAGCTATAAAATTGTTGCACCCAAACAGCATGCAAGGACCCTTGGAGTTTCAACAAGAGGTTGATGTGTTGAGCAAGATAAGGCATCCCAATCTTATCACACTTATAGGAGCCTGCCCTGAAACATGCACTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGTCTTGCCTGCAAGGACAACACACCTCCATTATCATGGCAAACTCGAATTCGCATTGCTGCAGAACTATGCTCTGCTCTTATCTTTCTCCATTCCAGTAAACCTCACAGCATAGTGCATGGTGACCTAAAACCATCCAATATTCTCCTTGATTCAAACCTTATCAGCAAGCTTAGTGACTTTGGAATCTGTCACATATTATCTCTTCACGATATTTCTAGTAACAACACCACACTGTTTAAGAGAGCAGACCCTACGGGAACTTTCGCCTACATGGATCCTCAATTCCTTTCTTCAGGGGAATTAACTCCGAAATCCGATGTTTATTCATTTGGCATCATATTGTTGAGATTGTTGACTGGTAGACAAGCCTTAGGAATAACAGAGGAAGTGAAGTATGCATTAGATACTGGAAAATTAAACTCCCTCTTGGATCCTTTAGCTGGAGACTGGCCATTTGTGAAGGCTGAACAGTTGACTCGCTTGGCTTTGAGGTGTTGTGAGATGAATAGAAAGAGTCGGCCTGACCTTCATTCCGATGTCTGGAGGACACTGGAACCAATGAGGGTTTCTTCTGGAGGTACAAACTCATTTGGACTATGTTCTGAAAGGCATTACCAACCTCCATATTTTATTTGTCCAATTTTTCAGGAAGTCATGCAAGATCCACATGTAGCTGCAGATGGTTTTACTTATGAAGCTGAGGCTATAAGAGGATGGCTTGACAGTGGTCATGACACTTCACCAATGACAAATTCTAGGCTTACACATCACAATCTAGTTCCCAACCATGCTCTTCGTTCTTCGATCCAGGACTGGCTTCAAGCTCGCTGA 2478 0.4165 MNMVMVNPEPLYVAVSKDLKENKLNLIWAIQNSGTKRICILHVHVPPTLIPFSSLKEQEDRAYQEFERQNMHKTLDDYLLICQRMGVQAEKLHIEMDSIEKGILELISQYNIQMLVMGAASDKNYSRRMMDLRSKKAIYVCEQAPASCHLWFICKGHLIQTREHSLDEGNVEAASPLVQKVPNSEAEHSLHLRSHSHALVQNHGANLTNPGQELFRRVKSANDGHGGSILDVSFQDDTEGYSSPCNQMGVEVCRDESNGLSKRSPSGLSTCPGSTAVEPALTPNLITEQGGRMNDTLYDQHEQPKGEAENATRNAYRETFRREKAEKDFMDTIHMAKASGSLYLDELDLRKLAEEELAKEIEELDNIKSQRDKVKEELQLAHNQKSSLESQISSSELMIKELEQKIISAVDLLQSYKNDRDELQIQRDSALREAEELRGKRGETLRMHVSQLFSEFSFSEIEEATSNFNPSLKIGEGGYGSIFKGILHHTEVAIKLLHPNSMQGPLEFQQEVDVLSKIRHPNLITLIGACPETCTLVYEYLPNGSLEDRLACKDNTPPLSWQTRIRIAAELCSALIFLHSSKPHSIVHGDLKPSNILLDSNLISKLSDFGICHILSLHDISSNNTTLFKRADPTGTFAYMDPQFLSSGELTPKSDVYSFGIILLRLLTGRQALGITEEVKYALDTGKLNSLLDPLAGDWPFVKAEQLTRLALRCCEMNRKSRPDLHSDVWRTLEPMRVSSGGTNSFGLCSERHYQPPYFICPIFQEVMQDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSRLTHHNLVPNHALRSSIQDWLQAR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1924 825 Gene3D Phosphorylase Kinase; domain 1 440 540 - -
Lan11g1924 825 MobiDBLite consensus disorder prediction 257 278 - -
Lan11g1924 825 ProSitePatterns Protein kinases ATP-binding region signature. 474 495 IPR017441 GO:0005524
Lan11g1924 825 Coils Coil 344 440 - -
Lan11g1924 825 Pfam Protein kinase domain 472 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1924 825 Pfam U-box domain 756 824 IPR003613 GO:0004842|GO:0016567
Lan11g1924 825 ProSiteProfiles Protein kinase domain profile. 468 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1924 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Lan11g1924 825 Pfam Universal stress protein family 28 129 IPR006016 -
Lan11g1924 825 SMART Ubox_2 758 821 IPR003613 GO:0004842|GO:0016567
Lan11g1924 825 CDD RING-Ubox_WDSUB1_like 759 800 - -
Lan11g1924 825 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 755 825 IPR013083 -
Lan11g1924 825 CDD STK_N 12 156 - -
Lan11g1924 825 Gene3D HUPs 17 150 IPR014729 -
Lan11g1924 825 PANTHER OS02G0152300 PROTEIN 8 288 - -
Lan11g1924 825 PANTHER OS02G0152300 PROTEIN 291 824 - -
Lan11g1924 825 SUPERFAMILY RING/U-box 755 824 - -
Lan11g1924 825 SMART serkin_6 468 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1924 825 SUPERFAMILY Protein kinase-like (PK-like) 447 726 IPR011009 -
Lan11g1924 825 Gene3D Transferase(Phosphotransferase) domain 1 541 744 - -
Lan11g1924 825 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 37 128 - -
Lan11g1924 825 PANTHER U-BOX KINASE FAMILY PROTEIN 291 824 - -
Lan11g1924 825 PANTHER U-BOX KINASE FAMILY PROTEIN 8 288 - -
Lan11g1924 825 MobiDBLite consensus disorder prediction 259 278 - -
Lan11g1924 825 ProSiteProfiles U-box domain profile. 754 825 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1924 Lan-Chr11 35848312 35854659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1924 9 823 U-box Gene Family AT2G45910 55.235 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan11g1924 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1924 - - gmx:100807515 1169.45