Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1918 ATGGATATGGCTTGTAGCTTAACACAGTCAAGAATGTTACATGGAGGTGTGGTAGGGTATAGTAACAAACACAACAAATCACTAGGTCGTTTTGATTCCAGAGGGAGATGTTTTTCGACTAGTGTTTCGAAGTTGCGTTTTAGTGGGAGGAACAGAATTAATGGTGTTTCTGTTGGGGAGATTAACGTCCGGAATTCGAGGACAACTTTGTCTTGTAAGAATAATAATAATAATATTCTTTTATTGGGGTCTAGAGTAGTTTGGTCAAAGTGCCAGGGTAGTGATTCTTTAGCATATGTTGATGGCAATGGCCGGAATGTTGATATTGTGGAAGGTTCGGGTGAGGACTCGGGGTTGGGGTCTGTTTCGAGTGCTGAACTGGATGCACCATTGGAAGAGGGAGAAGAAGGGGAGAAGGAAGGAGTCGAGGAACAAAATGTGGTTGAACTGAAAGAAGCATTGCAAAAGGCTTTGAAAGAGCTAGAAGTTGCACAAGTAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCAGAAAGTGCTTTGAATGATGTTAATTCTGCTATTAACGCCGTCCAAGAAATTGCTAGTGAAGAACAAATTGCCAAAGAAGCTGTCCATAACGCAACAATGGCTCTTTCATTAGCCAAGGCAAGGCTTCAAGTAGACTTAGAATCTTTGGAGGATACAAAAGAAGTGCATGATACAGTTAATGGCATAACAGAAGAGAATAAAGAACTTTTGATTGCTCAAGAAGATGCCAAGGAATTCCAGACAAAACTAGCCACTTATGAGGAAGAGCTGAGGCGGGTGCAAAATAGAAAGGAGGAGTTGCAGAAGGAAGTGGACAGATTACATGAAATTGCTGAAAAGGCACAACTGAACGCAGTGAAAGCTGAGGAAGATGTTACAAACATCATGCATTTAGCTGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAACGTGTAAATGATGCCGAGATTGCCTTACAGCAAGCGGAGAAATCTGTTTCTAATTTTAATGCTGATACAATAGAAACTGTACAAGTTCAAGATGTTCCTGAGGTGGAGAAAGTGGTTCAAGGATCTTCTGGTGATGTCACTGTCGAAAGAGATGGAGATTCGCCAACTGATGATGGATCTTTACTTGCCAAGTTATCACCAGAAACAAAATCTGATAAAACCAGCCAAACTTTGGATGACACAACACAGTCTGATTATTTGAGTGATAATGAGAATGCGGTTCAAGCAAAAAAGCAGGAAGCTCAGAAAGACACGAGTTCATCGTTTGCTCCCAAGACATTACTGAAGAAATCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTCTAATGAAGAGGAGTCTGAGTTTTCTCCAGCATCAGTTTTCCAGGGCCTCATGTTATCTGCACAGAAGCAGTTGCCCAAGCTGGTTCTTGGGTTACTGTTAATGGGAGCAGGGGTCACCTTCTATGTCAATAGAGCAGAGAGGAATACTCAGCTTCTTCAACAGCCAGATGTTGTTGTAACCAGTGTTGAAGAAGTTTCCTCTAGTGCTAAGCCTCTGATTAGGCTGCTTAAGAAACTCCCTAAGAAAATTAAGAAAATTATTGCGTCACTGCCTCATCAAGAGGTGAATGAGGAAGAAGCCTCTCTCTTTGACATGCTGTGGTTACTACTAGCAAGTGTCATATTTGTGCCAATATTTCAAAAACTTCCTGGAGGCAGTCCTGTTCTTGGGTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTGTCTATCATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTGTTCAATATTGGCCTAGAGCTCTCTGTAGAAAGGCTTAGTTCAATGAAGAAATATGTCTTCGGATTAGGCTCTGCACAGGTTTTGGCGACTGCTGTAGTTGTTGGCTTGGTGGCTCATTATATCTGTGGCATACCTGGCCCTGCTGCCATTGTCATTGGGAATGGCCTGGCATTGTCATCCACCGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCCCGACATGGGCGAGCTACATTTTCGGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATACCTCTCATTTCACCTAACTCTTCCAAAGGAGGGATTGGATTTCAAGCCATTGCTGAAGCTCTTGGACTGGCAGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGCGGACGATTGCTCCTTCGACCAATCTACAAGCAGGTTGCAGAAAATCAAAATGCCGAAATATTCTCTGCCAATACACTACTTGTTATTCTTGGAACTAGTCTTCTTACAGCCAGGGCAGGACTATCCATGGCACTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATCGCTCCATATCGTGGCCTTCTATTAGGGCTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTCCCAGTCATCACAGGGACACTGGGACTCTTAATATGTGGGAAGACTATCTTGATTTCTTTGATTGGTAAAATCTTTGGAATTTCTCTCATTTCTGCCCTAAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTCGTGGCTTTTGGTGATGCTGTTAATCAGGGCATAATGTCTTCCAAGTTGTCCTCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCAATCACGCCATGGCTAGCTGCAGGGGGGCAGCTGATTGCTTCTCGTTTTGAGCAACATGATGTTCGGAGTTTATTACCAGTAGAAAGTGAGACAGATGATCTGCAAGGTCATATCATTATTTGTGGATTTGGAAGAGTTGGCCAGATTATTGCCCAACTTCTTTCTGAGCGACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGGCAATAGGGAGAGCAATGGATCTTCCTGTATACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGATTGGTGCTGAAAGGGCTTGTGCCGCAGCAATAACTCTAGATACGCCTGGTGCAAATTATAGAACAGTTTGGGCTTTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACATTGGAACCAAGTCTTCAACTAGCAGCTGCTGTTCTTGCTCAGGCTAAGCTTCCCACATCAGAGATTGCAGCAACCGTAAATGAATTCAGATCCCGCCATCTAAGTGAGCTCTCAGAGCTATGTGAAGAAAGTGGAAGTTCTCTTGGTTATGGTTACAATAGAATTATGAGCAAACCCAAATCTCAAACCCAAGATTCATCAGATGAGACCCAATTGTCTCAAGGGACACTTGCAATTTGA 3507 0.4269 MDMACSLTQSRMLHGGVVGYSNKHNKSLGRFDSRGRCFSTSVSKLRFSGRNRINGVSVGEINVRNSRTTLSCKNNNNNILLLGSRVVWSKCQGSDSLAYVDGNGRNVDIVEGSGEDSGLGSVSSAELDAPLEEGEEGEKEGVEEQNVVELKEALQKALKELEVAQVNSTMFEEKVKKISETAISLHDEAESALNDVNSAINAVQEIASEEQIAKEAVHNATMALSLAKARLQVDLESLEDTKEVHDTVNGITEENKELLIAQEDAKEFQTKLATYEEELRRVQNRKEELQKEVDRLHEIAEKAQLNAVKAEEDVTNIMHLAEQAVAFELEATQRVNDAEIALQQAEKSVSNFNADTIETVQVQDVPEVEKVVQGSSGDVTVERDGDSPTDDGSLLAKLSPETKSDKTSQTLDDTTQSDYLSDNENAVQAKKQEAQKDTSSSFAPKTLLKKSSRFFSASFFSSNEEESEFSPASVFQGLMLSAQKQLPKLVLGLLLMGAGVTFYVNRAERNTQLLQQPDVVVTSVEEVSSSAKPLIRLLKKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVAHYICGIPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGTLGLLICGKTILISLIGKIFGISLISALRVGLLLAPGGEFAFVAFGDAVNQGIMSSKLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQGHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAMDLPVYFGDAGSREVLHKIGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATVNEFRSRHLSELSELCEESGSSLGYGYNRIMSKPKSQTQDSSDETQLSQGTLAI* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1918 1168 MobiDBLite consensus disorder prediction 1145 1168 - -
Lan11g1918 1168 Pfam Sodium/hydrogen exchanger family 570 940 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan11g1918 1168 Pfam TrkA-N domain 973 1086 IPR003148 GO:0006813
Lan11g1918 1168 Gene3D - 560 948 IPR038770 -
Lan11g1918 1168 Coils Coil 251 313 - -
Lan11g1918 1168 MobiDBLite consensus disorder prediction 111 144 - -
Lan11g1918 1168 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1168 - -
Lan11g1918 1168 Coils Coil 144 167 - -
Lan11g1918 1168 MobiDBLite consensus disorder prediction 400 420 - -
Lan11g1918 1168 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 969 1110 IPR036291 -
Lan11g1918 1168 Coils Coil 328 355 - -
Lan11g1918 1168 Gene3D - 970 1131 - -
Lan11g1918 1168 ProSiteProfiles RCK N-terminal domain profile. 972 1094 IPR003148 GO:0006813
Lan11g1918 1168 MobiDBLite consensus disorder prediction 1143 1168 - -
Lan11g1918 1168 MobiDBLite consensus disorder prediction 373 420 - -
Lan11g1918 1168 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 571 851 IPR004771 GO:0006812|GO:0008324|GO:0016021
Lan11g1918 1168 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1918 Lan-Chr11 35802382 35829751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1918 1 1168 Inorganic Solute Cotransporters AT4G00630 67.521 0.0 1413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1918 - - gmx:100818163 1602.42