Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1910 ATGGCGGAAGATGATGTTGCAGTTGATGCACTTTCCACGGATAATTGGTTGTTGCGTGCAGAGGAACTTGTTCCTGTTGCTATTGATAAGGCAAGAGAGGTCAAAGGGTTTCCTTGTAAATGGAAGATGATCGTTTCAAAATTAGAACAAATCCCGTCGCATTTATCAGACTTGTCAAGCCACCCTTGTTTCTCAAAGAATGCTCTTTGCATGGAGCAATTACAGGCCGTGTCGAAGACGCTCGGAGAAGCTATTGGATTAGCTGAGTTGTGTATGAAGGAAAAGAATGAGGGTAAGCTTAGGATGCAAAGTGATCTTGACGCATTAATCGGGAAACTGGAGTTGAATTTAAGGGATTGTGGCCTATTGATCAAGACTGGTGTCCTTGGCGAGGCTATGTTGCCATTGGCTGTGTCTTGTCCTGTGGAAGAATCAGATGTCGTAACACACAGCAACGTAAGGGAATTACTAGCGCGGCTTCAGATCGGTCACATGGAATCAAAGCACAAAGCTTTAGACAGTGTAATTGATGTTATGAAAGAAGACGAAAAAAATGTTTTGGCAGTACTGGGTAGGAGCAACATTGCTGCTCTAGTTCAGATGCTTACAGCGACATCTCCCAGGATAAGAGAGAAAACAGTTACTGTTATATCCTCGCTCGTAGAATCCGGGAGCTGCGAGAACTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATAAGGCTAGTTGAATCAGGTAGTGCTGTTGGTAAAGAGAAAGCAACAATATCTCTCCAGAGGTTATCAATGTTAGAAGAAACAGCTCGCGAAATCGTCGGACATGGTGGGGTATGTCCGCTGATTGACCTTTGTCGAACCGGTGATTCTGTGTCACAGGCTGCTGCAGCATGTACTTTGAAGAATATATCAGCTGTTCCAGATTTAAGACAAACTTTGGATGATGAAGGGATTGCTAAGGTTATGATCAATCTGCTTAACTGTGGAATTTTGTCGGCTTCCAAAGAGTACGCTGCCGAGTGTTTGCAGAACCTCACTGCAAGCAATGAGAATTTAAGGAGGGCTGTTATATCCGAAGGAGGTGTTAGAAGTCTTTTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCCGCAGTTGGAGCATTGAGGAATTTAGTCGGATCAGTTTCCAAGGATACTTTGGTTTCTCTAGGTGTCCTCCCGCGTCTGGCTCATGTTCTAAAGTCTGGATCCATAGGTGCTCAGCAAGCCGCCGCGTCTGCAATCTGCCGAATCTGCAGCTCAAACATGATTAAGAAAATGGTTGGTGAAGCAGGATGCATCCCTCTCCTTGTCAAGATGCTCGAGTCTAAATCAAACAGTGCTAGAGAGGTTGCTGCACAAGCAATTGCAAGCTTGATCATGCTTTCGCTGAATCGCCGAGAAGTTAAGAAGAACGATAAAAGCGTCCCGAACCTTGTTCAGTTGCTTGATCCAAGTCCTCATAACACTGCAAAAAAGTATGCAATTTCATGCCTTGGATTACTTTGTTCAAGTAATAAATGTAAGAAGTTGATGATCTCATATGGAGCAATTGGGTATCTGAAGAAACTTACCGATATGAACATTCCCGGAGCGAAAGCGTTGCAGGATCGATTGGAAAGAGGGAAATTAAGTTTGTTTTGCAAGAAATAG 1671 0.4393 MAEDDVAVDALSTDNWLLRAEELVPVAIDKAREVKGFPCKWKMIVSKLEQIPSHLSDLSSHPCFSKNALCMEQLQAVSKTLGEAIGLAELCMKEKNEGKLRMQSDLDALIGKLELNLRDCGLLIKTGVLGEAMLPLAVSCPVEESDVVTHSNVRELLARLQIGHMESKHKALDSVIDVMKEDEKNVLAVLGRSNIAALVQMLTATSPRIREKTVTVISSLVESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMLEETAREIVGHGGVCPLIDLCRTGDSVSQAAAACTLKNISAVPDLRQTLDDEGIAKVMINLLNCGILSASKEYAAECLQNLTASNENLRRAVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVSKDTLVSLGVLPRLAHVLKSGSIGAQQAAASAICRICSSNMIKKMVGEAGCIPLLVKMLESKSNSAREVAAQAIASLIMLSLNRREVKKNDKSVPNLVQLLDPSPHNTAKKYAISCLGLLCSSNKCKKLMISYGAIGYLKKLTDMNIPGAKALQDRLERGKLSLFCKK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1910 556 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 4 556 - -
Lan11g1910 556 Gene3D - 144 369 IPR011989 -
Lan11g1910 556 Gene3D - 371 535 IPR011989 -
Lan11g1910 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 556 - -
Lan11g1910 556 SMART arm_5 347 386 IPR000225 GO:0005515
Lan11g1910 556 SMART arm_5 387 426 IPR000225 GO:0005515
Lan11g1910 556 SMART arm_5 264 304 IPR000225 GO:0005515
Lan11g1910 556 SMART arm_5 427 467 IPR000225 GO:0005515
Lan11g1910 556 SMART arm_5 468 510 IPR000225 GO:0005515
Lan11g1910 556 SMART arm_5 182 222 IPR000225 GO:0005515
Lan11g1910 556 Pfam Armadillo/beta-catenin-like repeat 269 304 IPR000225 GO:0005515
Lan11g1910 556 Pfam Armadillo/beta-catenin-like repeat 430 465 IPR000225 GO:0005515
Lan11g1910 556 Pfam Armadillo/beta-catenin-like repeat 389 426 IPR000225 GO:0005515
Lan11g1910 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 438 474 IPR000225 GO:0005515
Lan11g1910 556 SUPERFAMILY ARM repeat 151 533 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1910 Lan-Chr11 35753746 35757105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1910 397 532 U-box Gene Family AT3G54790 29.412 4.09e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1910 - - gmx:100781453 878.626