Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1908 ATGAACATGATGAGAAGGTTAACAACCATTGCTTCTGTAGGGGATTCTATTACCAATAATAAAAAGTTTGATCAAGAAAACGAAGGAAAGGTCAATGAGGAAACGAATCCTGTTGAGAGGGACGACAAAGATCAGGAGCAGCACGTAGATGCATCGAGAGAAACTACTGTTGGAACTATTGTAGAGACAACTGAGAAGTCAGGTTATGTCCAGCTTCCAAAAGAATCAAACGAAATGAAAATTAGAGATGAGAAGTGCAAAATCAACAATGATAAGGATATGGAGACGGGTGTTGTGAATGGTAATGGAACAGAAACGGGTCAAATAATTACAACTACTATTGGTGGTCGAGATGGACAACCGAAGAAGAAAATCTCATATATGGCAGAACGTGTGGTTGGTACTGGTTCTTTCGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGCGAAGAAGTCGCAATAAAGAAGGTGTTGCAAGACAAGAGATATAAGAATCGGGAACTACAGGTTATGGTTATGCTTGACCATACTAACGTTCTTAAACTAAAGCACTGTTTCTATTCGACAGCCGATAAAGATGAATTGTACCTTAACCTAGTTTTGGAGTATGTGCCTGAAACAGTCTACAGAGTTTCTAAGCACTATATTAGAATGCACCAAAGCATGCCTATCCTTTTAGTGCAACTGTATATATATCAGATATGTCGTGGCTTAAATTATATGCACCATGTCATCGGTGTTTGTCATCGAGATATCAAACCACAAAATCTATTGGTTAATCCCCAGAGTCACCACTTAAAAATATGCGATTTTGGGAGTGCAAAGAAGCTGGTGCCTGGTGAACCCAACATATCATACATATGCTCGCGGTATTATAGAGCTCCAGAACTTATATTTGGGGCAACCGAATACACAACTGCAATTGATATTTGGTCTGTTGGATGTGTTTTGGCTGAGCTACTTCTAGGCCAGCCGATGTTTCCTGGAGAGAGTGGTGTTGATCAGTTGGTGGAGATAATCAAGATCCTTGGAACACCAACCAGAGAAGAAATAAGGTGCATGAACCCGAATAATTACAATGAATTTAAGTTTCCTCAGATAAAAGCGCACCCATGGCACAAGGTTTTTCGCAAAAGGATGCCTCCTGAAGTAGTGGATCTTATTTCTCGGATGCTTCAGTATTCGCCAAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCCTTCTTTGACGATCTTCGAGACCCGAAAGTATCCTTGCCTAATGGGCGGGCAATGCCTCCTTTGTTCGATTTCACACCTCAAGAACTGGCAGACGCACCCGATGAGTTGCGTCAACGTCTCATTCCGGAGCATGCAAGGAGTTGA 1374 0.4178 MNMMRRLTTIASVGDSITNNKKFDQENEGKVNEETNPVERDDKDQEQHVDASRETTVGTIVETTEKSGYVQLPKESNEMKIRDEKCKINNDKDMETGVVNGNGTETGQIITTTIGGRDGQPKKKISYMAERVVGTGSFGVVYQAKCLETGEEVAIKKVLQDKRYKNRELQVMVMLDHTNVLKLKHCFYSTADKDELYLNLVLEYVPETVYRVSKHYIRMHQSMPILLVQLYIYQICRGLNYMHHVIGVCHRDIKPQNLLVNPQSHHLKICDFGSAKKLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIRCMNPNNYNEFKFPQIKAHPWHKVFRKRMPPEVVDLISRMLQYSPNLRCTALEACAHPFFDDLRDPKVSLPNGRAMPPLFDFTPQELADAPDELRQRLIPEHARS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1908 457 SUPERFAMILY Protein kinase-like (PK-like) 127 440 IPR011009 -
Lan11g1908 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Lan11g1908 457 ProSiteProfiles Protein kinase domain profile. 127 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1908 457 Pfam Protein kinase domain 127 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1908 457 ProSitePatterns Protein kinases ATP-binding region signature. 133 157 IPR017441 GO:0005524
Lan11g1908 457 MobiDBLite consensus disorder prediction 15 53 - -
Lan11g1908 457 PANTHER SHAGGY-LIKE KINASE 45 457 - -
Lan11g1908 457 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
Lan11g1908 457 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 45 457 - -
Lan11g1908 457 SMART serkin_6 127 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1908 457 MobiDBLite consensus disorder prediction 21 51 - -
Lan11g1908 457 Gene3D Transferase(Phosphotransferase) domain 1 207 456 - -
Lan11g1908 457 CDD STKc_GSK3 122 415 IPR039192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1908 Lan-Chr11 35742567 35747322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1908 133 415 Core Cell Cycle Gene Families AT3G48750 35.395 1.38e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lan11g1908 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1908 K00924 - gmx:100784150 748.814