Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1899 ATGGATCATGTTGTCTCACAAGGTCATTCTCTCCCATCTTTTCTCACTAGAGATCTTCATTTAAACCCTTTCCACCAATTCCAACCTCATCACCACAATCACAATAACGACAACACCGAAGAAGATAACAATAAGAACAACGTCGATAACTTCTTAAACAGAGGCTTAAATCGAGATCAGAACAAAAACATCACTACCAATACTATCACTTCCAGAGTCTCTGCCGTCTCGGAAGACGGCAGAGAATTCAGCTCAACCATGAGCCTAGGAGATAATAGTGAGATGGGTGCAATAAGAAGATCAAGAGGTAGACCTACAGGATCCAAGAACAAACCTCAACCACCAATCATTATCAACAAAGACAGCGCCAACGCTCTCCGATCGCACCTCATCGAAATCAGCGACGGCTGCGACATCATGGAGAGCGTTGCCGCCTATGCACGGCGGAGGCAGCGCGGCGTTTGCATTCTTAGCGCCAGCGGCGCCGTAACCAACGTCATCCTACGGCAGCCAGCATCTGCCGGTGCAGTTGTGACACTAAATGGAAGATATGATATCTTGTCATTGTCCGGCTCCTTCCTACCACCGCCTGCTCCGCCGGCGGCTGCCTCCAGTTTGGCCATATATCTGGGTGGTTCACAAGGCCAAGTGGTTGGTGGAAGCGTGGTGGGACCCTTGTTAGCTTCTGGTTCCATTGTAATCATGGCTGCTTCTTTTGGTAATGCATCATATGAACGGTTGCCATTGGAAGAAGAGGAAGAAACTTCACCGGTACACGGTGGTGGAGGGTTAGGGTTAGGATCATCCGAGATTATAGGAGAACAACAACATCGCAACCGCAACCACAACCACAACCACAATAACTATCATCAACAACAGATAGAAGCAGATCATAACACAACTTCAGTATATAATGGGGTGTCACATAATCTTCTCAATTCATTTGAATTATCTTCAGCTGAGGGTGGTTTTTGGGGTGGAAATGGTCGTAGTTCTTTTTGA 1002 0.4701 MDHVVSQGHSLPSFLTRDLHLNPFHQFQPHHHNHNNDNTEEDNNKNNVDNFLNRGLNRDQNKNITTNTITSRVSAVSEDGREFSSTMSLGDNSEMGAIRRSRGRPTGSKNKPQPPIIINKDSANALRSHLIEISDGCDIMESVAAYARRRQRGVCILSASGAVTNVILRQPASAGAVVTLNGRYDILSLSGSFLPPPAPPAAASSLAIYLGGSQGQVVGGSVVGPLLASGSIVIMAASFGNASYERLPLEEEEETSPVHGGGGLGLGSSEIIGEQQHRNRNHNHNHNNYHQQQIEADHNTTSVYNGVSHNLLNSFELSSAEGGFWGGNGRSSF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1899 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 240 IPR005175 -
Lan11g1899 333 Gene3D - 126 256 - -
Lan11g1899 333 CDD DUF296 127 193 IPR005175 -
Lan11g1899 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 254 - -
Lan11g1899 333 MobiDBLite consensus disorder prediction 25 115 - -
Lan11g1899 333 MobiDBLite consensus disorder prediction 248 269 - -
Lan11g1899 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 10 332 - -
Lan11g1899 333 MobiDBLite consensus disorder prediction 45 92 - -
Lan11g1899 333 MobiDBLite consensus disorder prediction 30 44 - -
Lan11g1899 333 ProSiteProfiles PPC domain profile profile. 123 260 IPR005175 -
Lan11g1899 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 332 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1899 Lan-Chr11 35684329 35685485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1899 98 254 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 64.968 2.46e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1899 - - lang:109359498 501.901