Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1882 ATGTTGGAGTATGAATGGGATACCCCATCAACAACAACAACAATGCTCACCGGAAATGAAGGCGGCGCCACCACAAAACCCGACCAAAACCACCACCAAACATTGGATCAAAACTACACTTTTCTACATGAACCTAACCAATTCTCTAGTCCCACATTGACCACCACCAATTTCTCTCACTACCACCTCTTCAACTTCAACCAACAACAAAATCACCCTTTCTTTCATCCACGCGCCTTCCATAGCGCGTCCTCACCTTCTTTCTCAACCGTACCACCATCCATGCTCTCCTTTAACCAATTCCCACCTCTCAACCACACCAACTATGAGCCCGAGCCCGAGTCCGGGCGAATTACAGCGTCTGAGTCCGACAATGTTTATTGGCCCATGCGCTTCTCAGGTTCGACCGGGCTCGGGCTCGACCTAGGTAGAAAAACATACTTTCCTTCTTCCTCCAATGATTTTGTGAACCCGGTTCACCACCGACCTAATCTAGTTGAACCGGGTTTAACCACTTCATCATCGATGTCTAACTCGCCGCGGTGCCAGGCGCAGGGCTGCAATGCTGACCTCTCCGATGCAAAACACTACCACCGCCGCCATAAGGTGTGTGAGTTTCACTCCAAAGCCGCCACCGTCATAGCTGCCGGTTTGACTCAGCGGTTTTGCCAACAGTGCAGCAGGTTCCATCTTCTTTCAGAGTTTGATAATGGAAAACGTAGCTGTAGAAAAAGACTAGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCAAGATCAAGAAAACCAGAACTACTAG 801 0.4894 MLEYEWDTPSTTTTMLTGNEGGATTKPDQNHHQTLDQNYTFLHEPNQFSSPTLTTTNFSHYHLFNFNQQQNHPFFHPRAFHSASSPSFSTVPPSMLSFNQFPPLNHTNYEPEPESGRITASESDNVYWPMRFSGSTGLGLDLGRKTYFPSSSNDFVNPVHHRPNLVEPGLTTSSSMSNSPRCQAQGCNADLSDAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQQDQENQNY* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1882 266 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 50 258 IPR044817 GO:0003677
Lan11g1882 266 MobiDBLite consensus disorder prediction 1 30 - -
Lan11g1882 266 Pfam SBP domain 182 255 IPR004333 GO:0003677
Lan11g1882 266 SUPERFAMILY SBT domain 180 259 IPR036893 GO:0003677|GO:0005634
Lan11g1882 266 MobiDBLite consensus disorder prediction 246 266 - -
Lan11g1882 266 ProSiteProfiles Zinc finger SBP-type profile. 179 256 IPR004333 GO:0003677
Lan11g1882 266 Coils Coil 239 259 - -
Lan11g1882 266 Gene3D - 172 243 IPR036893 GO:0003677|GO:0005634
Lan11g1882 266 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10 50 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1882 Lan-Chr11 35522709 35524869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1882 1 229 SBP-box Gene Family AT1G02065 39.130 8.66e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan11g1882 SBP 4.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1882 - - lang:109360145 550.821