Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g1872 | ATGAGTCGTAGAGTGAGGAGGAAAGTGGCAAGGAGAAGCGAAGGGAATGTGGTGTTAGGGGGTTGGCCTGAAATTCAAGACGAAGTTTTGGATTTAAAATGCCGAGGGATTGTTGATTGGACGAGCTTACCCGATGATACAGTGATTCAGTTGTTGTCATGTTTAAGTTATCGAGACCGAGCTAGTTTATCGTCCACTTGTAGGACATGGAGGTCTCTTGGCAGTTCACCATGTTTGTGGACTTCTCTGGATATTCTGTCCAACAGGTTTGATGTCAACATGGCATCTTCACTTTCTCCTAGGTGTGTGCATCTTCAGAAGCTTAGATTTCGTGGGGCTGAATCTGCCGATGCAATAATTCATCTCCGAGCTAGGAACTTGCGTGAGTTAAGTGGTGACTATTGCAGGAAGATTACTGATGCGACTCTTGCAGTTATTGGGGCACGACATGAGTTACTTGAGAGCCTTCAGCTTGGACCAGATTTCTGTGAGAGAATCACTAGTGATGCTATTAAAGCAGTAGCTCATTGCTGCCCTAGATTGAATAAAATAAGGCTCTCTGGTGTTCGGGACGTAAATGCTGATGCTATTAATGCCTTGGCTAAGCATTGTCCAAAATTGGCTGATATTGGGTTCATTGACTGTCTGAAAGTTGACGAGGTTGCATTAGGAAATGTATCATCGCTTCGTTTCCTTTCTGTTGCCGGGACTTCGGGCATGAAGTGGGGCGTGGTTTCCAATCTTTGGCATGAGCTGCCTAACCTGATTGGATTAGATGTTTCAAGAACTGATATTGGTCCATCTGTTGTTGCAAGGTTGTTAGCTTCATCGCAGAACTTGAGGATTTTGTGTGCTTTGAATTGTCCTATCCTTGAAGAAGATGCAAGCTTTTCTGCTAGTAAATATAAGAACAAGCTACTAATTTCCCTTTTTACTGATATTTTTAAAGGACTGGGTTCTTTATTTTTTGATGCTACATACAAAGGCAAAAACGTGTTTTTGGATTGGAGGAATTCAAATAAGAATGATAAGGAGCTTAATGAAATCATACCCTGGCTTGAGTGGATGCTATCCCATACACTTTTGCGATCGGCTGAGAGCCCTCAACAGGGTTTGAACAATTTCTGGGTTGAACAAGGTGCAGCACTCTTGCTTAGTCTAATGCAAAGTTCTCAAGAGGATGTTCAAGAGAGGGCAGCCACGGGTCTTGCAACTTTTGTCGTAATTGACGATGAAAATGCCAGAATTGATTGTGGTAGGGCTGAAGCAGTTATGCGCAATGGTGGCATACACCTCCTTCTTGGCTTAGCAAAATCTTGGAGGGAAGGGCTTCAGTCTGAGGCAGCCAAGGCCATTGCAAACTTGTCCGTCAATGCCAATGTGGCCAAAGCTGTTGCAGAAGAGGGTGGGATTGATATTCTCGCTGGTCTGGCCAGGTCAACAAACAAGTTGGTGGCTGAAGAAGCTGCCGGGGGATTGTGGAACCTCTCTGCTGGAGAGGAGCACAAGGGTGCAATTGCTGAAGCTGGTGGAATACAAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTGGAACGTGCTGCTGGTGCATTGGCTAATTTGGCAGCTGATGATAAGTGTAGTACAGAAGTTGCTGCGGCAGGAGGTGTACATGCTCTAGTGATGCTTGCTCGTAACTGCAAATTCGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTAGCTGCTCATGGAGATAGCAATAGTAACAATGCTGCCGTTGGACAAGAAGCCGGTGCACTTGAGGCACTTGTTCAACTGACACGTTCTACACATGAGGGTGTTAGTCAAGAAGCTGCTGGTGCGCTTTGGAATTTGTCATTTGACGATAGAAATCGAGAAGCCATTGCAGCAGCTGGTGGAGTTCAAGCCTTGGTTGCCCTTGCCCAATCATGTTCTAATGCATCCACTGGACTTCAAGAGAGGGCTGCTGGTGCACTTTGGGGATTGTCAGCTTCTGAAGCCAATAGCATCGCCATTGGACGAGAAGGAGGTGTTGCACCTCTGGTTTCATTGGCAAGGTCTGAAGTAGAGGATGTTCACGAAACCGCTGCTGGGGCACTATGGAATCTTGCTTTCAACCCGGGTAATGCTCTTCGAATAGTGGAAGAAGGAGGAGTTTCTGCACTTGTCTATCTCTGCTCTTCATCAGTATCAAAAATGGCCCGGTTCATGGCTGCATTGGCATTGGCTTACATGTTTGATGGGAGAATGGATGAATTTGCTACAGTAGGCACTTCATTAGAAAGTACTTCTAAGAGTGTGAGCTTGGATGGAGCTAGAAGAACTGCTTTGAAAAACATTGAAGCTTTTGTTCTCAAGTTTTCTGATACACAAGCATTTGCGGCTGCTGCTGCATCGTCAGCTCCCGCGGCATTAGCACAGGTTACCGAAGGTGCTCGTATTCAAGAAGCAGGACATCTGAGATGCAGTGGTGCTGAAATTGGAAGATTTGTTACTATGCTACGAAGTCCATCGTCTACACTCAAAGCTTGCGCGGCTTTTGCTCTTCTCCAGTTCACAATTCCCGGTGGACGACATGCTACGCACCATGCTAGCCTCATGCAGAATGCAGGAGCAGCAAGAGTTCTTCGTAGTGCAGCCGCAGCAGCAACCGCGCCACTCGAAGCGAAAATCTTCGCCAGAATTGTCCTTCGTAATCTTGAGCATCACCAGATAGAGTACAAAGTCTAG | 2757 | 0.4614 | MSRRVRRKVARRSEGNVVLGGWPEIQDEVLDLKCRGIVDWTSLPDDTVIQLLSCLSYRDRASLSSTCRTWRSLGSSPCLWTSLDILSNRFDVNMASSLSPRCVHLQKLRFRGAESADAIIHLRARNLRELSGDYCRKITDATLAVIGARHELLESLQLGPDFCERITSDAIKAVAHCCPRLNKIRLSGVRDVNADAINALAKHCPKLADIGFIDCLKVDEVALGNVSSLRFLSVAGTSGMKWGVVSNLWHELPNLIGLDVSRTDIGPSVVARLLASSQNLRILCALNCPILEEDASFSASKYKNKLLISLFTDIFKGLGSLFFDATYKGKNVFLDWRNSNKNDKELNEIIPWLEWMLSHTLLRSAESPQQGLNNFWVEQGAALLLSLMQSSQEDVQERAATGLATFVVIDDENARIDCGRAEAVMRNGGIHLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSTNKLVAEEAAGGLWNLSAGEEHKGAIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVAAAGGVHALVMLARNCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSTHEGVSQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASTGLQERAAGALWGLSASEANSIAIGREGGVAPLVSLARSEVEDVHETAAGALWNLAFNPGNALRIVEEGGVSALVYLCSSSVSKMARFMAALALAYMFDGRMDEFATVGTSLESTSKSVSLDGARRTALKNIEAFVLKFSDTQAFAAAAASSAPAALAQVTEGARIQEAGHLRCSGAEIGRFVTMLRSPSSTLKACAAFALLQFTIPGGRHATHHASLMQNAGAARVLRSAAAAATAPLEAKIFARIVLRNLEHHQIEYKV* | 919 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g1872 | 918 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 685 | 727 | IPR000225 | GO:0005515 | |
| Lan11g1872 | 918 | ProSiteProfiles | F-box domain profile. | 37 | 83 | IPR001810 | GO:0005515 | |
| Lan11g1872 | 918 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 510 | 555 | IPR000225 | GO:0005515 | |
| Lan11g1872 | 918 | SMART | LRR_CC_2 | 204 | 229 | IPR006553 | - | |
| Lan11g1872 | 918 | SMART | LRR_CC_2 | 150 | 177 | IPR006553 | - | |
| Lan11g1872 | 918 | SMART | LRR_CC_2 | 178 | 203 | IPR006553 | - | |
| Lan11g1872 | 918 | SMART | LRR_CC_2 | 124 | 149 | IPR006553 | - | |
| Lan11g1872 | 918 | PANTHER | PROTEIN ARABIDILLO 1 | 1 | 913 | IPR044583 | - | |
| Lan11g1872 | 918 | SMART | fbox_2 | 43 | 83 | IPR001810 | GO:0005515 | |
| Lan11g1872 | 918 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 469 | 511 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 37 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g1872 | - | - | ccaj:109792060 | 1512.28 |
Showing 1 to 1 of 1 entries