Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1868 ATGGCTTTCACTACCATGAACTCAAATCTTGAACATGTTCCACAACATCTTCATCACAATGATTCAAACACTGTAATAACTGTTTCACACATAAAATCATATCAAACACTTCCAAGCCCTAGTTGTGACAGTAATTCTGATACAACAGTGTTGTTTCACAGTCACCATTCTACCACCTCCACCGTGGGTGAACCTCACGCGCCTCCTACATGGAAGCATTACCGCGGCGTAAGGCGTAGACCGTGGGGAAAGTTTGCAGCAGAGATCAGAGACCCAAAGAAAAATGGTGGTAGGGTTTGGCTTGGAACTTATGAAAGTGAAGAAAAAGCAGCTATAGCTTATGATAAAGCTGCTTTTAAGATACGTGGCCAAAAAGCTAAGTTGAATTTTCCAAATCTCTTAGGGTTAGATTCACCAATATCACCATTGTTATTAGAGAATAGTTCAGATTCACAAGGATTGAAGAGAAGAAAAAACTTTGCTGATTTACTCAATAAGTTAGCTAAGAATAGAAACCAAGCCATGAGGTTTAATCATATTTAG 543 0.3904 MAFTTMNSNLEHVPQHLHHNDSNTVITVSHIKSYQTLPSPSCDSNSDTTVLFHSHHSTTSTVGEPHAPPTWKHYRGVRRRPWGKFAAEIRDPKKNGGRVWLGTYESEEKAAIAYDKAAFKIRGQKAKLNFPNLLGLDSPISPLLLENSSDSQGLKRRKNFADLLNKLAKNRNQAMRFNHI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1868 180 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Lan11g1868 180 PRINTS Ethylene responsive element binding protein signature 113 133 IPR001471 GO:0003700|GO:0006355
Lan11g1868 180 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 9 173 - -
Lan11g1868 180 Gene3D AP2/ERF domain 72 132 IPR036955 GO:0003700|GO:0006355
Lan11g1868 180 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Lan11g1868 180 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Lan11g1868 180 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Lan11g1868 180 PANTHER DNA-BINDING DOMAIN 9 173 IPR044808 GO:0003700|GO:0009873
Lan11g1868 180 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Lan11g1868 180 CDD AP2 72 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1868 Lan-Chr11 35349144 35349801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1868 73 135 AP2-EREBP Transcription Factor Family AT2G44840 80.952 9.77e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan11g1868 AP2 3.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1868 K09286 K13433 gmx:100806588 189.504