Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1866 ATGGAGAGAGTTGCAGAACCAAGGGCACTTCCTCGGACCTTGCCTGACCTGGCTGAGGTATCGAACACACACGCAGCTGCAATAAGAGAAGCTAGGAAGGAGGTTTCAAGTATGCACGGAGTAAGAGAAGTGAATCAGATTTCTAAAGCACGGGATGGCCCTCTGACACGTCTGGGCTCCATCAAAGAGTTGGCTCAATTATCGAATGCAAGAGTAGTTTTCGTAAGAGAAGATATGGGATTTGATACACGATGCTCTCAACAACCTGTCTCCCCTGCTGCACCTACAAGAACATGGAAAGGAAAGGCCTCTTTTCCAAAACGAGAAGAACTTATGCCTGATATTGAGATATTGAAGGGGAGCGATGATTCATTTCGGGAAAGTGGACCAAGTTCATTTTCTGGTGTTAGTCATCCCCCGGAACCTATTGACACTGATCCTATGAGAACAGTTTATGTACCGATAAGTCAGAACAAATCTGAGTCTGGATGCTTAATGAAGAGCATGTCTTTGAAGGGTCCTTTCCTAGAAGATCTTTCAATTCGTGTTCCCTCTAAAAAACCAAGCCTAGCTATTCTTTCTCCTGAAGAAATTCTGGTTGAAGAATCAAATGATACGGGAAACTTATCCTCGCCATATTTGGGTGCCCGTGTATCACAGAATACGGAGAATTCTCTCCTTGCTCCAGATTCTGATGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGTAATGTCAGTCCACATAGTAGCATTGATAGTAATGGTGTTGTGAGAGCAATGAGCATTGCTACTAGTTGTGCAAGTACGTATCGGAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACAGGAATTTTGATAATGCTAAAGGAAGTGTGAGGGGAGATTCACTCGAGAGTGGAAAAACAAGTGCGAGTCGAGCAAGTGATAGTAGTGTCCTCAGTGATGACAGCAACTGGAGTAACTTAACTGGTAGCGCTTATAAGCCTCACAAAGGAAATGATCCTAGGTGGATGGCTATCCTTGCTGTCCGAGCTCGGGATGGGATTTTGGGCATGAGTCATTTTAAGTTATTAAAACGACTTGGCTGTGGTGATATTGGAAGTGTATATCTCTCAGAGTTGAGTGCTACTCGGTGTTACTTCGCAATGAAAGTTATGGACAAGGCGTCCTTGGCAAGCAGAAAGAAGCTGACTAGGGCACAGACGGAAAGGGAGATACTGCAGTTGCTGGACCATCCATTTCTGCCAACTTTGTATACACATTTCGAGACTGATAGATTCTCCTGTTTGGTAATGGAATACTGTCCAGGTGGTGACCTACACACTTTACGGCAACGGCAACCTGGGAAACATTTCTCGGAGTATGCTGCACGCTTTTATGCAGCAGAGGTCTTGTTGGCGCTTGAGTATCTTCACATGCTAGGAGTCGTGTATCGAGACCTTAAACCGGAAAATGTGTTGGTTCGAGATGATGGTCACATAATGCTCTCAGACTTTGATCTTTCTCTTAGATGTGCTGTTTCACCTACACTCGTCAGAACTTATGACGGTGACCCGTCAAAGCGTGCTGGTGGTGCATTCTGTGTCCAGCCTGCATGTATTGAGCCTTCATCGGTATGCATTCAACCTTCTTGCTTTTTGCCTCGGATCTTTCCTCAGAAAAACAAGAAGTCCCGGAAGCCTAAGGCTGAGCCTGGGTTCCCAGGCAACAGACTTCCAGAGCTTGTCGCTGAACCTACAGCAGCTCGGTCCATGTCCTTCGTTGGCACGCATGAATACCTTGCCCCGGAAATTATCAAAGGTGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGTATGAGCTATTATATGGTAAAACCCCTTTCAAAGGATCAGGAAACCGCGCTACATTGTTCAATGTAGTAGGTCAGCAGCTAAAGTTTCCCGATTCGCCAGCTACCGGTTATGCTAGCCGGGATCTTATCCGTGGCTTGCTGGTGAAGGAGCCACAGCACCGTCTCGGGGTGAAGAGGGGTGCAACCGAGCTCAAACAGCATCCGTTCTTCGAAGGTGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCAGACGTGCCAAGACCAGTCGAAACTGAGCCACCAGCTAAGTTCGAAACAGTTGATACCGTTGCGGTTGGCAACAATAGTAAGAGGATGGCAGGTAATGACATGAAGCCTGGGGGAAATTTTCTGGACTTCGAGTTCTTTTAA 2259 0.4626 MERVAEPRALPRTLPDLAEVSNTHAAAIREARKEVSSMHGVREVNQISKARDGPLTRLGSIKELAQLSNARVVFVREDMGFDTRCSQQPVSPAAPTRTWKGKASFPKREELMPDIEILKGSDDSFRESGPSSFSGVSHPPEPIDTDPMRTVYVPISQNKSESGCLMKSMSLKGPFLEDLSIRVPSKKPSLAILSPEEILVEESNDTGNLSSPYLGARVSQNTENSLLAPDSDEKECVWDASLPPSGNVSPHSSIDSNGVVRAMSIATSCASTYRSDAITSDGMLSLDRNFDNAKGSVRGDSLESGKTSASRASDSSVLSDDSNWSNLTGSAYKPHKGNDPRWMAILAVRARDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVRTYDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFLPRIFPQKNKKSRKPKAEPGFPGNRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLYGKTPFKGSGNRATLFNVVGQQLKFPDSPATGYASRDLIRGLLVKEPQHRLGVKRGATELKQHPFFEGVNWALIRCSTPPDVPRPVETEPPAKFETVDTVAVGNNSKRMAGNDMKPGGNFLDFEFF* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1866 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Lan11g1866 752 CDD STKc_phototropin_like 358 711 - -
Lan11g1866 752 SMART serkin_6 360 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1866 752 MobiDBLite consensus disorder prediction 295 322 - -
Lan11g1866 752 Gene3D Phosphorylase Kinase; domain 1 358 443 - -
Lan11g1866 752 PANTHER FLIPPASE KINASE 1-RELATED 69 752 - -
Lan11g1866 752 ProSiteProfiles Protein kinase domain profile. 360 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1866 752 Pfam Protein kinase domain 361 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1866 752 Pfam Protein kinase domain 589 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1866 752 SUPERFAMILY Protein kinase-like (PK-like) 341 717 IPR011009 -
Lan11g1866 752 MobiDBLite consensus disorder prediction 120 147 - -
Lan11g1866 752 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 69 752 - -
Lan11g1866 752 MobiDBLite consensus disorder prediction 301 322 - -
Lan11g1866 752 Gene3D Transferase(Phosphotransferase) domain 1 444 516 - -
Lan11g1866 752 Gene3D Transferase(Phosphotransferase) domain 1 588 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1866 Lan-Chr11 35325414 35330249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1866 1 752 AGC Kinase Gene Family AT2G44830 66.242 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan11g1866 Pkinase 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1866 - - gmx:100818352 1267.29