Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1857 ATGGTGAAGATGGTTCGAAGTAGCCGAATTTTCAGTGATTGTGTTATTGTTAGTTTCTTGATGCTGATTAGTTTTGGCATGACTTATGCGACTGAAAGTGATATCTTCTGCTTGAGAAATGTAAAAGATTCACTTAAGGACCCGTACAATTATCTGTGGTCCTGGGATTTCACCAACAAAACCGAAGGGTTTATCTGCAAATTTAATGGGGTTGAATGCTGGCATCCTGATGAGAATAGAGTCTTAAATCTTAAATTGTCGAACATGGGACTGAAGGGCCAGTTTCCTCGTGCCATTCAAAATTGCTCAAGCTTAACAGGATTGGATCTTTCAATTAACAAACTCTCTCTAACCATTCCGGGAGATATATCAACCCTTCTCGCTTTTGTGACATCTCTTGATCTATCTTCCAATGATTTTTCCGGGGAGATCCCTGTGTCCCTTGCAAACTGTACCTATCTCAATCATCTTACACTTGACAAAAACCAACTCACGGGTCAAATTCCTGCAGAATTTAGTCTGCTCCCACGGCTTAAATCCTTTAGTGTCGCTAATAATTTTTTGACAGGGCCAGTTCCAATCTTTAGACAAAACATAGTTACAGAAGAAAGTTATGCAAATAATTCAGGCCTCTGTGGACCTCCCTTGGATCCTTGTCAAGCCGAGTCTTCGAAGAGTAACACCGCAGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTGTTGCAATATTAGGAATTGGTATTGGATTGTTCTTCTATGTACGCCGATTTCCTTTCAAGAAAAAGGAAGAGGACCCTGAAGAAAACAAATGGGCAAGAAGTCTAAAGGGAACTAAAGCAGTAAAGGTTTCTATGTTTGAGAATTCAGTTTCAAAAATGAAATTGAGTGACCTGATGAAGGCTACTAGTAACTTCAGTAAAAGCAATATTATTGGATCCGGGAGAACAGGAACTGTTTACAAAGCTGTCCTTGATGACGGCACAACACTCATGATTAAGAGATTGCAGCAATCTCAACACTCGGACAAAGAATTTATGTCAGAGATGGCTACACTCGGGACTGTCAAACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCCAGACCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCGATTGGCATCCTCCATGATCTACTACATCCTGCTGAAGGTGGAAGCACCATCGAATGGTCGTTTAGGCTCAAAATAGCTATTGGAGCAGCCAAAGGATTGGCATGGCTTCATCATAGTTGCAATCCCCGTATTATCCACCGAAACATAAGCTCTAAGTGCATTTTGTTGGACGAAGATTTCGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGACTTATGAACCCAATTGATACACATTTAAGTACTTTTGTTAATGGGGAGTTTGGGGATATCGGTTACGTTGCTCCCGAGTATGCAAGAACTTTGGTGGCTACACCAAAAGGGGATGTTTATAGCTTTGGCACTGTGCTTCTTGAGTTGGTGACAGGTGAAAGGCCTAACCATGTGGCTAAAGCTCCAGAAACCTTTAAAGGAAATCTGGTAGAATGGGTTACAGAACTCTCAAGCAACGCAAAACTCCAAGACGCCATTGATGAATCACTAGTCGGGAAGGGTGTTGATGCCGAGATTTTCCAATGCTTAAAGGTTGCATGCAACTGTGTTAGAGCAACTCCAAAGGAGAGACCCAGCATGTTTGAAGTGTACCAGCTTCTAAGAGCCATCGGTAGTAAATATAATTTCACAATTGAGGATGAAATAATGGTACCTATAGATACTGGTGATGCTGGTAACTTAGAGGAACTTATCGTAGCACGAGAGGAAAAATGA 1851 0.4138 MVKMVRSSRIFSDCVIVSFLMLISFGMTYATESDIFCLRNVKDSLKDPYNYLWSWDFTNKTEGFICKFNGVECWHPDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSLTIPGDISTLLAFVTSLDLSSNDFSGEIPVSLANCTYLNHLTLDKNQLTGQIPAEFSLLPRLKSFSVANNFLTGPVPIFRQNIVTEESYANNSGLCGPPLDPCQAESSKSNTAVIAGAAVGGVTVAILGIGIGLFFYVRRFPFKKKEEDPEENKWARSLKGTKAVKVSMFENSVSKMKLSDLMKATSNFSKSNIIGSGRTGTVYKAVLDDGTTLMIKRLQQSQHSDKEFMSEMATLGTVKHRNLVPLLGFCQTKKERLLVYKNMPIGILHDLLHPAEGGSTIEWSFRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDEDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDIGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPNHVAKAPETFKGNLVEWVTELSSNAKLQDAIDESLVGKGVDAEIFQCLKVACNCVRATPKERPSMFEVYQLLRAIGSKYNFTIEDEIMVPIDTGDAGNLEELIVAREEK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1857 616 Gene3D Phosphorylase Kinase; domain 1 266 378 - -
Lan11g1857 616 PANTHER LRR RECEPTOR-LIKE KINASE 8 593 - -
Lan11g1857 616 CDD STKc_IRAK 311 579 - -
Lan11g1857 616 Pfam Protein kinase domain 306 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1857 616 ProSiteProfiles Protein kinase domain profile. 305 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1857 616 Gene3D Ribonuclease Inhibitor 32 220 IPR032675 -
Lan11g1857 616 PANTHER RECEPTOR-LIKE PROTEIN 55 8 593 - -
Lan11g1857 616 SUPERFAMILY L domain-like 31 199 - -
Lan11g1857 616 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Lan11g1857 616 Gene3D Transferase(Phosphotransferase) domain 1 380 597 - -
Lan11g1857 616 SUPERFAMILY Protein kinase-like (PK-like) 283 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1857 Lan-Chr11 35266159 35283400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1857 14 593 Receptor kinase-like Gene Family AT3G28450 47.099 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lan11g1857 Pkinase 5.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1857 - - gmx:100817267 946.036