Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1848 ATGGCCTCTATCATTAACTCAAAACCATTTGCACCAAACACTGTTTTCAAAGATTGTTCTCAAGGAATTTGCAGCATATATTGTCCTCAATGGTGCTACATAATTTTCTCTCCTCCTCCTTCTTCTTCCATAACTCTTGGTGATAATGACTTAGATAATGATGATAACTCTTCAAGTTTTCATTTTTCTCCTCTAATAGTTGCTGTTATTGGAATATTAGCTAGTATTTTCATCTTGGTCACTTACTATACCATAATCTCAAGGTTCTGTAAGAATAGTTATAGAACTAATAATGAAGTTACCAACTTCAATATAGAACATCATGAAGATGGTGTTAACAACAATGAATTGTCTCAAGTTTCTTCATCTTTTGGCCTTGATGAGACTCTTATCAAATCAATAACAGTTTGTAAGTACAAGAAAGATAGTGTTTTGGTTGATGGTATTGATTGTTCTGTTTGTTTGAGTGAGTTTCAAGAGAATGAGAGTTTGAGACTATTGCCTAAATGTAACCATGCTTTTCATATTCCTTGTATTGATCCATGGTTGAAATCTCATTCAAGTTGCCCTTTGTGTCGGTCGAATATCGATCCAACTCAAAGAGATGGTAGTAGTTCAATATTGATGGATGCACCAGCTACCATGAACATGAGTATCAATGCATTGGAATACCAACAAAGGAGTGAAGATGTTGTTATAGTAATTCCGAGTTCCGAGTCGAGTATTGATCATGATGTGCTTAGTTTTGATAATGATGCTCTTCCAAAGTGGCCAGTGGAAAGTGCTACTGCTGATGATGATGATGATGATGATGGTGGTGGTGGAGAGAATGTAAGAAGGGTATCGGTACGCGATATATTGAACGACAATGAACACGATGTCGAGTTACAAATGGAGGGATCTGATATAGGGTCATCAAGAGGAGTGGTGAATATGGTGAAGATATATGCATCAAAAGGAAGATCTATGTTCATAAGGTATGGTAGTAAGTAA 993 0.3615 MASIINSKPFAPNTVFKDCSQGICSIYCPQWCYIIFSPPPSSSITLGDNDLDNDDNSSSFHFSPLIVAVIGILASIFILVTYYTIISRFCKNSYRTNNEVTNFNIEHHEDGVNNNELSQVSSSFGLDETLIKSITVCKYKKDSVLVDGIDCSVCLSEFQENESLRLLPKCNHAFHIPCIDPWLKSHSSCPLCRSNIDPTQRDGSSSILMDAPATMNMSINALEYQQRSEDVVIVIPSSESSIDHDVLSFDNDALPKWPVESATADDDDDDDGGGGENVRRVSVRDILNDNEHDVELQMEGSDIGSSRGVVNMVKIYASKGRSMFIRYGSK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1848 330 CDD RING-H2_PA-TM-RING 150 193 - -
Lan11g1848 330 SMART ring_2 151 192 IPR001841 -
Lan11g1848 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 199 IPR013083 -
Lan11g1848 330 ProSiteProfiles Zinc finger RING-type profile. 151 193 IPR001841 -
Lan11g1848 330 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 251 IPR044675 -
Lan11g1848 330 Pfam Ring finger domain 150 193 IPR001841 -
Lan11g1848 330 MobiDBLite consensus disorder prediction 258 279 - -
Lan11g1848 330 PANTHER E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE 3 251 - -
Lan11g1848 330 SUPERFAMILY RING/U-box 136 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1848 Lan-Chr11 35181955 35183096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1848 1 309 C3H Transcription Factor Family AT3G03550 40.882 1.73e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1848 - - lang:109355345 444.121