Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1844 ATGCATCAGAAAAAATCAGAAGTTCAGATCGGAAAAGAAACCATTGGTGTCTCTTCCGATTTCAATCATCCTTTTTCAGTTCACCAAAAATTTCATCACAATCATAATCATATTCATAATCACTTTTTCCCTCAAATTATCACTACTCAACATGAATTATTATTATCTTCATCAACACCTTATAAAAGAACCCAAACCCCTTTTTCTTCTTTATCCAAATCCCCAACCTTATCTCAATTATCACACCATTCCCGACCGCAACCGCAATTTAAAACACTTAATATTACGGCGGTTATAAGGAGTACAGTTATCTGTCTCCTCCGCCGCCTCAAATACCTACGTAACCACCGCCATCTCCGCCCTACCCTCCTCCTCTCTCTCCCCTTCTTCTACTTCCTTGTTTCTCACTCAACACACTCTTTCCTTCTTGATTTTCTCTCAGCTTTCGCTTTCTCCGCCGTACTCCTCCTCTCCCTTAACCTAACCCTCCCTCGCCTCCCCTCTCTCCGCCTCTTCCTCGCCCGCTCCCTCAAGCCCTCCGCCTCTCCCCGCCCTGTGCCCCGGCTCCCGGTTTTCTGGACCATCGGGTCGCGGCACAAGGCGGAGAGGCGGGCGGTTGCGGTTGCGGCGTCACCGGGATCGAACTCTTGTTCGGAGTGCTGGGTGCAGGTGTATGGTAATGGTGATGTTTATGAAGGGGAATTTCATAAGGGAAAGTGTTCAGGGAGTGGAGTGTATTATTACAGTATGAGTGGGAGGTATGAAGGGGATTGGGTTGATGGGAAGTATGATGGGTATGGTGTGGAGACTTGGGCTCGGGGTAGCCGATTTCGCGGTCAATATCGAAAGGGATTGAGGAATGGGTTTGGGGTGTATAGATTTTACACTGCTGATGTTTATGGTGGGGAGTGGTTTAATGGACAGAGTCATGGGTGTGGGATTCATACTTGTGAAGATGGGAGTAGGTATGTTGGGGAGTTTAAATGGGGTGTTAAGCATGGACTTGGACACTACCATTTCAGAAATGGGGATACCTATGCCGGCGAATACTTTGCGGACAAGATGCACGGGTTTGGAGTATATCATTTTGCAAATGGCCACCGATATGAAGGAGCTTGGCATGAAGGCAGAAGGCAAGGACTTGGAATGTACACATTTAGAAATGGCGAAACCCAATCTGGTCACTGGGAAAATGGAGTCCTTGACATTCCAAGCACACAGAGCACCACTTATCCAGTTTCTCCTGTTGGTGTCTATCATTCCAAAGTACTCAATGCAGTTCAGGAAGCAAGAAGAGCAGCAGAGAAAGCTTATGATGTGGCCAAGGTAGATGAGAGGGTGAACAGAGCAGTAGCAGCTGCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCAGTCAAAGCTGTGCAAAAACAAATGCACCATGTTAACCATGAAAGCTTCCCAATTCCTATAGTTTAA 1461 0.4689 MHQKKSEVQIGKETIGVSSDFNHPFSVHQKFHHNHNHIHNHFFPQIITTQHELLLSSSTPYKRTQTPFSSLSKSPTLSQLSHHSRPQPQFKTLNITAVIRSTVICLLRRLKYLRNHRHLRPTLLLSLPFFYFLVSHSTHSFLLDFLSAFAFSAVLLLSLNLTLPRLPSLRLFLARSLKPSASPRPVPRLPVFWTIGSRHKAERRAVAVAASPGSNSCSECWVQVYGNGDVYEGEFHKGKCSGSGVYYYSMSGRYEGDWVDGKYDGYGVETWARGSRFRGQYRKGLRNGFGVYRFYTADVYGGEWFNGQSHGCGIHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYHFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWENGVLDIPSTQSTTYPVSPVGVYHSKVLNAVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQKQMHHVNHESFPIPIV* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1844 486 Gene3D - 306 352 - -
Lan11g1844 486 Gene3D - 218 260 - -
Lan11g1844 486 Gene3D - 261 305 - -
Lan11g1844 486 Gene3D - 353 417 - -
Lan11g1844 486 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 48 477 - -
Lan11g1844 486 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 318 402 - -
Lan11g1844 486 SMART morn 367 388 IPR003409 -
Lan11g1844 486 SMART morn 298 319 IPR003409 -
Lan11g1844 486 SMART morn 321 342 IPR003409 -
Lan11g1844 486 SMART morn 344 365 IPR003409 -
Lan11g1844 486 SMART morn 229 250 IPR003409 -
Lan11g1844 486 SMART morn 275 296 IPR003409 -
Lan11g1844 486 SMART morn 252 273 IPR003409 -
Lan11g1844 486 MobiDBLite consensus disorder prediction 65 85 - -
Lan11g1844 486 PANTHER - 48 477 - -
Lan11g1844 486 Pfam MORN repeat 231 251 IPR003409 -
Lan11g1844 486 Pfam MORN repeat 346 368 IPR003409 -
Lan11g1844 486 Pfam MORN repeat 302 322 IPR003409 -
Lan11g1844 486 Pfam MORN repeat 369 390 IPR003409 -
Lan11g1844 486 Pfam MORN repeat 254 276 IPR003409 -
Lan11g1844 486 Pfam MORN repeat 323 345 IPR003409 -
Lan11g1844 486 Pfam MORN repeat 277 295 IPR003409 -
Lan11g1844 486 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 225 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1844 Lan-Chr11 35145044 35148423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1844 223 412 Acyl Lipid Metabolism Gene Families AT2G41210 33.684 1.13e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1844 - - lang:109361368 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1223 7 16925251 16929015 Lan11g1844 11 35145044 35148423 LSH
Lan11g1844 11 35145044 35148423 Lan1g0731 1 17140333 17143423 PCT