Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1841 ATGATGGAAAATGATTACCATAATGTTGTTGATGATGATGAAAACCAACTTGAGTTAAAGCCAATCCACTTTTTCAAGATCATACTCAATTTCAACCTCCTTCAAGGGAAATTAATGATTCCTAGAGCATTCACGGAGAAGTATGGCGAAGGCTTACCGAAAACTATAATTCTTAAGGCACCAAATGATGAAGAATGGGAAGTAAATTTGGTCAAACATGATGGTAAAATATGGTTCCACAAGGGTTGGAAAGAATTTGCAGAGTATCACTCTCTAGAGGAAGGGCATTTTGTTGTTTTCAAATATGAAAAAAGTTCCAATTTTGAGGTATTCATCTTTGATATGAGTGCCTTAGAGATGGACTACCCTTTCAAAAGAGTAGAAGGTAAAAGGGCCTACAACGATCGAAGAGATAAACATGCAATGGTTGAAAGCTTGGAAGATTGCAGACCAAGTCAACAGAGAAAAGATAACTCATCATTGGAATTTCTTCAACTTAATAAGAAAAGTAGATGTGTTGAAGTTGAGAGTATCTCAAATTTGTCAAAGGCAACTCTGTGTCACACTGGCATAAAGTGTGAAGAGGGACCACATACTACTGCTAAGCAGATTACAGCTCTGGACATGGCTCATTCATTCAAACCTTCTAATCCATCCTTCATGGTTGTCATGCATCCATCATACATCTTCTCCCGTGTTCTTCCGAGTTTACCACCAAAGTTTTGTAAGAGACACTTTGATTTCGACAACGAGCGTAGAGAGGTCAATCTTCGGGTGTCCAATGGTAGAGTATGGCCTGTAAGATACGTTATCACGAAAATCAAGAGAGGAACAAAATTTGAACTTTCAAGGGGGTGGAATGCATTTGCGAAGGACAATAACTTGAAAGTAGGTAATGTCTGCACCTTCGAACTCGTTGATAAAAGGAATCTTAGCTTCGAGGTTTACATCTCAGGCGGGACTGACAATTCAATTTGTTCAACATCTCAAGAGAAACCAGAAATTGCTACTAGTTCTAAACAAACTACCGCTCTCGACAGAGCTAGAAACTTCAAACCTTGTAACCCATCCTTCTTGGTTGTCATGCATCGATCATACGTCAATTTTCGAGCTAAGTTGAATTTACCATCCAAGTTTTGTAAGAGATACTTTGACATGGGCATAAAGAATGGAGATATCAGTCTAATGTCGGCAAATGGGAGAGTCTGGCCTGCAAGGTACTGCATTAGGGGAAACTGTGATGGATCAAAATTTGAATTCCGAAGTGGGTGGAAACAATTTTCCGAGGACAACAACTTAGAAGTAGGCGATGTTTGCATCTTCGAACTCATTGATAGAACTAAGCTTGCCTTCCAAGTTTGTATCTTTAGAGTGTCTGATAATTCAAATTGTCCAGCTTCTCAAGAATCTTCTGATGAGGAAGTGAAGGAAAGTGACATGAATATGAAGGGAATGTAG 1458 0.3903 MMENDYHNVVDDDENQLELKPIHFFKIILNFNLLQGKLMIPRAFTEKYGEGLPKTIILKAPNDEEWEVNLVKHDGKIWFHKGWKEFAEYHSLEEGHFVVFKYEKSSNFEVFIFDMSALEMDYPFKRVEGKRAYNDRRDKHAMVESLEDCRPSQQRKDNSSLEFLQLNKKSRCVEVESISNLSKATLCHTGIKCEEGPHTTAKQITALDMAHSFKPSNPSFMVVMHPSYIFSRVLPSLPPKFCKRHFDFDNERREVNLRVSNGRVWPVRYVITKIKRGTKFELSRGWNAFAKDNNLKVGNVCTFELVDKRNLSFEVYISGGTDNSICSTSQEKPEIATSSKQTTALDRARNFKPCNPSFLVVMHRSYVNFRAKLNLPSKFCKRYFDMGIKNGDISLMSANGRVWPARYCIRGNCDGSKFEFRSGWKQFSEDNNLEVGDVCIFELIDRTKLAFQVCIFRVSDNSNCPASQESSDEEVKESDMNMKGM* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1841 485 CDD B3_DNA 218 317 IPR003340 GO:0003677
Lan11g1841 485 SUPERFAMILY DNA-binding pseudobarrel domain 19 116 IPR015300 -
Lan11g1841 485 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 317 - -
Lan11g1841 485 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 326 458 - -
Lan11g1841 485 Pfam B3 DNA binding domain 358 458 IPR003340 GO:0003677
Lan11g1841 485 Pfam B3 DNA binding domain 25 112 IPR003340 GO:0003677
Lan11g1841 485 Pfam B3 DNA binding domain 220 316 IPR003340 GO:0003677
Lan11g1841 485 SMART B3_2 220 321 IPR003340 GO:0003677
Lan11g1841 485 SMART B3_2 24 116 IPR003340 GO:0003677
Lan11g1841 485 SMART B3_2 358 459 IPR003340 GO:0003677
Lan11g1841 485 ProSiteProfiles B3 DNA-binding domain profile. 220 321 IPR003340 GO:0003677
Lan11g1841 485 SUPERFAMILY DNA-binding pseudobarrel domain 351 459 IPR015300 -
Lan11g1841 485 MobiDBLite consensus disorder prediction 470 485 - -
Lan11g1841 485 Gene3D - 336 461 IPR015300 -
Lan11g1841 485 Gene3D - 198 320 IPR015300 -
Lan11g1841 485 CDD B3_DNA 356 457 IPR003340 GO:0003677
Lan11g1841 485 CDD B3_DNA 23 114 IPR003340 GO:0003677
Lan11g1841 485 MobiDBLite consensus disorder prediction 462 485 - -
Lan11g1841 485 Gene3D - 17 117 IPR015300 -
Lan11g1841 485 ProSiteProfiles B3 DNA-binding domain profile. 23 116 IPR003340 GO:0003677
Lan11g1841 485 ProSiteProfiles B3 DNA-binding domain profile. 358 459 IPR003340 GO:0003677
Lan11g1841 485 PANTHER B3 DOMAIN-CONTAINING 326 458 - -
Lan11g1841 485 PANTHER B3 DOMAIN-CONTAINING 15 317 - -
Lan11g1841 485 SUPERFAMILY DNA-binding pseudobarrel domain 215 321 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1841 Lan-Chr11 35113498 35118080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1841 328 460 B3 DNA Binding Superfamily AT3G18990 33.835 9.37e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan11g1841 B3 3.8e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1841 - - lang:109359945 500.745