Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1839 ATGGATTTGGTCAAGGGAAATGAAGCAGAAAATAACTGTATAGAAGAGAGTACAAGCATATTTGATGGAGTTGAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGAAGCTGCCAGAAAATTTTATGTTGAATATGCCAGACGGGTTGGATTTGTTGTGCGCGTTATGCAACGTCGACGTTCAGGTATTGATGGGAGGACTCTTGCTCGCCGTCTCGGATGTAACAAACAAGGATTCTCACCAAATAACAAGTTAGGGCCAGAGAAAAAGCCAAAACCGAGTGCCCGAGAAGGTTGCAATGCAACAATTTTGGTGAAGTTGGAAAAATCTGGAAAATGGGTTGTCACAAGGTTTATAAAGGATCACAACCATCCTCTGATTGCTAATGCTAATGGGTTCAGCACAGCAGATGATAAAGATAAGAAAATAGCAGAGCTTACGACGGAGCTAGAGCGCCAGGACCAATTGTGCGCTGAATATCGAGAAAAACTACTCAGCTTCATAAAAAATGTCGAGGAGCAAACGGATGATCTTTCCACAAAAATTCAACTCATTGTTGAAAATATCAGGAGAGCCGAGTCTGAAATGCAAAACTGTTGTAAGATCAGAAAACCTGGGTGCTTAACCATAACAGGTGTATAA 645 0.414 MDLVKGNEAENNCIEESTSIFDGVEEPYVGMEFDSEEAARKFYVEYARRVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNNKLGPEKKPKPSAREGCNATILVKLEKSGKWVVTRFIKDHNHPLIANANGFSTADDKDKKIAELTTELERQDQLCAEYREKLLSFIKNVEEQTDDLSTKIQLIVENIRRAESEMQNCCKIRKPGCLTITGV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1839 214 Coils Coil 137 164 - -
Lan11g1839 214 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 200 - -
Lan11g1839 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 22 200 - -
Lan11g1839 214 MobiDBLite consensus disorder prediction 76 98 - -
Lan11g1839 214 Pfam FAR1 DNA-binding domain 41 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1839 Lan-Chr11 35104058 35107379 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan11g1839 FAR1 5.2e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1839 - - vun:114183030 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1839 11 35104058 35107379 Lan1g0896 1 19738614 19741300 PCT
Lan1g0896 1 19738614 19741300 Lan11g1839 11 35104058 35107379 PCT