Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1835 ATGGATGGCATTAGGGGTGTAAGCGGTTCCAGTTTAAATCGTGAAACTGATGGAATCGAACCGTATGTGACAGTGGATCAAAATAGTGAAAGGAACTTGTTTTACTATTTTGTTGCATCAGAAAGTAACCCATCTAAGGACCCAGTAGTTCTATGGCTTAATGGTGGACCAGGATGCTCTAGCATGGACGGCTTCGTATTTGAGCATGGTCCTTTTAATTTTGAGAAACCAAAGACTAAGGGAACTCTACCTAACTTGCATCTCAATCCATATAGTTGGTCAAAGGTTTCCAATATCATATATTTGGATTCTCCTGCTGGAGTTGGATTTTCATACTCAAAGAACAAGGCTGATTATAGAACCGGAGATGTAAAGACAGCTATTGATTCACATAACTTTCTCCTTGAGTGGTTTAAGCTATACCCTGAGTTCCTTTCTAATCCATTATTCCTTGCTGGAGAGTCATTTGCTGGAATCTATATACCTACTCTTGCTCAACAAATAGTACAAGGATTCAATGCTGGTGCAAAACCCAAGCTGAATTTCAAGGGTTACTTGATTGGAAATGGTGTTACAGATAATGAATTTGATGGCAATGCTATCGTTCCATATGCACATGGAATGGGACTCATCAGTGATCAGATTTTTGAGGATATCAAAGGCCAATGCCTTGGAAGATACCATGGTAGAATCAATAATATAACCTGCTTACAAATGATGCTTAAAGTGGATAAGGTGCTTGGAAGTTTAAACCCATATGACACTCTAGAACCATGTTATCATGGCTCGGAGAACACAAAATCTGATAATAGGTTGCCACTCAGTTTTAGGAAGTTGGGTGAGACAGATAAACCTATGCCTGTTAGAAGAAGAATGTTCGGTCGTGCTTGGCCCCTAGGACAACATGTGAAGAGTGGAATTGTACCAACTTGGCCAGAACTTAGTTATACTGGCAGTGTTCCTTGCTTTGATGATGAGGTTGGAACCGTATGGCTGAATAATGAAGCTGTCAGGAAAGCAATTCATACAGTAGATAAAAGTGTGGTCGACGAGTGGAAATTATGCACAAATAATATTGAGTACAATCATGATGAAGGAAGCATGATTGAATTCCACAAAAAACTAACTTCCAATGGATATCGAGCACTTATATACAGTGGAGATCATGACTTATGTGTTCCATATACTGGTTCTGAAGCATGGACAAGTTCACTAGGGTACAAGATTATTGATGAATGGAGGGCTTGGTTAGTTGATGGTCAAGTTGCTGGGTTTACACAAGGTTATGAGAAAAATCTTACTTTTTTGACCATAAAGGGAGCGGGGCATACTGTTCCAGAATATAAACCAAAAGAGTCTTTATATTTCTATAAACGTTTTCTGGATGGATTGCCTATGTAA 1401 0.3911 MDGIRGVSGSSLNRETDGIEPYVTVDQNSERNLFYYFVASESNPSKDPVVLWLNGGPGCSSMDGFVFEHGPFNFEKPKTKGTLPNLHLNPYSWSKVSNIIYLDSPAGVGFSYSKNKADYRTGDVKTAIDSHNFLLEWFKLYPEFLSNPLFLAGESFAGIYIPTLAQQIVQGFNAGAKPKLNFKGYLIGNGVTDNEFDGNAIVPYAHGMGLISDQIFEDIKGQCLGRYHGRINNITCLQMMLKVDKVLGSLNPYDTLEPCYHGSENTKSDNRLPLSFRKLGETDKPMPVRRRMFGRAWPLGQHVKSGIVPTWPELSYTGSVPCFDDEVGTVWLNNEAVRKAIHTVDKSVVDEWKLCTNNIEYNHDEGSMIEFHKKLTSNGYRALIYSGDHDLCVPYTGSEAWTSSLGYKIIDEWRAWLVDGQVAGFTQGYEKNLTFLTIKGAGHTVPEYKPKESLYFYKRFLDGLPM* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1835 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Lan11g1835 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 89 101 IPR001563 GO:0004185|GO:0006508
Lan11g1835 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 102 112 IPR001563 GO:0004185|GO:0006508
Lan11g1835 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 162 IPR001563 GO:0004185|GO:0006508
Lan11g1835 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Lan11g1835 466 Gene3D - 319 465 - -
Lan11g1835 466 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 8 463 - -
Lan11g1835 466 Gene3D alpha/beta hydrolase 3 278 IPR029058 -
Lan11g1835 466 SUPERFAMILY alpha/beta-Hydrolases 22 465 IPR029058 -
Lan11g1835 466 Pfam Serine carboxypeptidase 22 463 IPR001563 GO:0004185|GO:0006508
Lan11g1835 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 463 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1835 Lan-Chr11 35052958 35060758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1835 301 466 Calmodulin-binding Proteins AT2G22960 43.605 6.07e-41 143