Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1820 ATGAACAACCTCCACGATAATAACAACCACCGCAGCCTCACCACACCCACCACCGTATTGGATTTCAATAATCTCAAAGTAATCTCCGCCGTGGGACGCGGCGCCAAAGGCGTCGTGTTCCTGTCGAAACTAAAAGCAAAATCAACAACTTGTGATGACGATGTTCCGAAAAAGGAACCGTGGATAGCGTTGAAACTTATTTCTAAAGCGTTGCTTCAGAAGAAGAATAGGAATAACGGGGAGTGCAAGAGGGTGTTGTTTGAACAACAGATACTACGTCGTTTTCATCATCCGTTATTGCCACGGTTACGAGGGGTTTTGGAAACGGAACAACTCACTGGGTATGGCATTGATTTTTGCCATGGTGGGAACATGCATTCTTTACGTAAGAAACAATCTGAAAAGACGTTCTCTGAAGAAATCATAAGGTTTTACGCTGTGGAATTGGTGTTAGTATTGGAATATTTACACAATCTTGGAGTTGTGTATAGAGATTTGAAGCCAGAAAATATCATGATTCAAGAAACGGGTCACATTATGCTTGTGGATTTCGACCTCTCTAAGAAGCTAAATTCAATAACACCACAATCACTGAGTTACAACTCGTCACCGAGTTCTGACTCGGAAACTCAGAACCGTCGTAGAAAGTTTCGCCACCGATGGTTCTCCCGATTCTACTGTAAATGCAACTCGGGTATTTTTCCTTACGACTCAGACGGTCAACTCGGTACAAACTCGCCAACTCGGAGCGAGTCAAACTCGGTGGAAAAGTCTAACTCGTTCGTTGGAACGGAGGATTACGTGGCACCTGAGGTTATTTCGGGAAATGGACATAACTTCGTTGTTGATTGGTGGTCACTCGGCGTCGTTTTATATGAGATGTTATATGGAACGACACCGTTTAAGGGCACAAATAGGAAAGACACGTTTTTTCGAATTTTAATGAAGGAACCAGATTTAACTGGTGAAGCGACGTCGTTAAGGGATTTGATTAGTAAAATGCTTGAGAAAGATCCTGACCGTAGGATTGAGGTAGATGGAATAAAGGGCCATGATTTCTTTAAGGGTGTGAAGTGGAACACGGTTTTGGAAATTGCACGTCCACCGTATATTCCTCATAATGAAGTAGAGGATAGAAAAGGGTTTTCGAAAATAGAGGTTGAGTCTTTTATACATGGAATATTTTTTCCAAATAATGGAGTGGGAGAGAAAAATAAAGAGGGGGAGAAGAAGAAATGTGAAGAAGAAAATGGGGAAAATAATAAGAATTATAATGATAAACCTGGGTGGGTTGATAAGTTGAATCATAATCCCACTCAGAATAATGAGACTTTTGTAGGTTTTTGA 1347 0.4128 MNNLHDNNNHRSLTTPTTVLDFNNLKVISAVGRGAKGVVFLSKLKAKSTTCDDDVPKKEPWIALKLISKALLQKKNRNNGECKRVLFEQQILRRFHHPLLPRLRGVLETEQLTGYGIDFCHGGNMHSLRKKQSEKTFSEEIIRFYAVELVLVLEYLHNLGVVYRDLKPENIMIQETGHIMLVDFDLSKKLNSITPQSLSYNSSPSSDSETQNRRRKFRHRWFSRFYCKCNSGIFPYDSDGQLGTNSPTRSESNSVEKSNSFVGTEDYVAPEVISGNGHNFVVDWWSLGVVLYEMLYGTTPFKGTNRKDTFFRILMKEPDLTGEATSLRDLISKMLEKDPDRRIEVDGIKGHDFFKGVKWNTVLEIARPPYIPHNEVEDRKGFSKIEVESFIHGIFFPNNGVGEKNKEGEKKKCEEENGENNKNYNDKPGWVDKLNHNPTQNNETFVGF* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1820 448 SMART serkin_6 25 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1820 448 Gene3D Phosphorylase Kinase; domain 1 25 123 - -
Lan11g1820 448 ProSiteProfiles Protein kinase domain profile. 25 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1820 448 ProSiteProfiles AGC-kinase C-terminal domain profile. 355 448 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan11g1820 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lan11g1820 448 Gene3D Transferase(Phosphotransferase) domain 1 124 192 - -
Lan11g1820 448 Gene3D Transferase(Phosphotransferase) domain 1 254 373 - -
Lan11g1820 448 MobiDBLite consensus disorder prediction 434 448 - -
Lan11g1820 448 Pfam Protein kinase domain 255 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1820 448 Pfam Protein kinase domain 29 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1820 448 SUPERFAMILY Protein kinase-like (PK-like) 11 388 IPR011009 -
Lan11g1820 448 MobiDBLite consensus disorder prediction 401 448 - -
Lan11g1820 448 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 17 420 - -
Lan11g1820 448 PANTHER FLIPPASE KINASE 1-RELATED 17 420 - -
Lan11g1820 448 MobiDBLite consensus disorder prediction 403 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1820 Lan-Chr11 34850047 34852200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1820 17 437 AGC Kinase Gene Family AT3G25250 52.995 1.96e-144 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan11g1820 Pkinase 1.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1820 K20714 - gmx:100785773 497.278