Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1816 TGTTATTATAGGTATGAGCTCGGTCGTCAGCCAGCAAACACCAAGTTATCAAGCAACAAAACAGTGAGGAGGATTCGTGTTAGGGGTGGAAATGTCAAGTGGAGGGCATTAAGATTGGACACTGGAAACTTTTCATGGGGTAGTGAAGCTGTGGCTCGCAAGACCCGTCTTCTTGATGTTGTTTACAATGCCTCCAACAATGAGCTGGTCCGAACTCAGACCCTGGTCAAGGGAGCAATTGTTCAGGTTGATGCTGCTCCATTTAAGCAATGGTACCTTCAGCACTATGGTGTTGAAGTTGGTAGGAAAAAGAAAACAGCATCCAAGAAGGATACTGCAGAGGAGGGTGAAGCAGCTGCTGCTGAAGAAACCAAGAAAAGTAACCATGTCCAGAGAAAAATTGAGAAGCGCCAGACAGATCGTAACCTTGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTTGCCGCTATTTCCTCTCGCCCTGGTCAATGTGGCAGGGCTGATGGGTACATTTTGGAAGGTAAGGAACTGGAGTTTTACCTGAAGAAACTCCAGAAGAAGAAGGGAAAGGGTGCTGCCTAA 591 0.4687 CYYRYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVARKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEVGRKKKTASKKDTAEEGEAAAAEETKKSNHVQRKIEKRQTDRNLDSHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYLKKLQKKKGKGAA* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1816 196 Pfam Ribosomal protein S8e 5 175 IPR022309 -
Lan11g1816 196 TIGRFAM eS8: ribosomal protein eS8 4 177 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lan11g1816 196 MobiDBLite consensus disorder prediction 104 146 - -
Lan11g1816 196 CDD Ribosomal_S8e_like 4 175 - -
Lan11g1816 196 Gene3D - 140 193 - -
Lan11g1816 196 Gene3D - 10 139 - -
Lan11g1816 196 PANTHER 40S RIBOSOMAL PROTEIN S8 4 196 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lan11g1816 196 PANTHER 40S RIBOSOMAL PROTEIN S8 4 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1816 Lan-Chr11 34806824 34808180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1816 4 184 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 81.768 9.89e-107 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1816 K02995 - gmx:100794937 326.25