Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1815 ATGGGTATTTCTAGGGATTCCATGCATAAGAGGCGTGCCACTGGTGGCAAAAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTCGGTCGTCAGCCAGCAAACACCAAGTTATCAAGCAACAAAACAGTGAGGAGGATTCGTGTTAGGGGTGGAAATGTCAAGTGGAGGGCATTAAGATTGGACACTGGAAACTTTTCATGGGGTAGTGAAGCTGTGGCTCGCAAGACCCGTCTTCTTGATGTTGTTTACAATGCCTCCAACAATGAGCTGGTCCGAACTCAGACCCTGGTCAAGGGAGCAATTGTTCAGGTTGATGCTGCTCCATTTAAGCAATGGTACCTTCAGCACTATGGTGTTGAAGTTGGTAGGAAAAAGAAAACAGCATCCAAGAAGGATACTGCAGAGGAGGGTGAAGCAGCTGCTGCTGAAGAAACCAAGAAAAGTAACCATGTCCAGAGAAAAATTGAGAAGCGCCAGACAGATCGTAACCTTGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTTGCCGCTATTTCCTCTCGCCCTGGTCAATGTGGCAGGGCTGATGGGTACATTTTGGAAGGTAAGGAACTGGAGTTTTACCTGAAGAAACTCCAGAAGAAGAAGGGAAAGGGTGCTGCCTAA 657 0.4718 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVARKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEVGRKKKTASKKDTAEEGEAAAAEETKKSNHVQRKIEKRQTDRNLDSHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYLKKLQKKKGKGAA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1815 218 MobiDBLite consensus disorder prediction 1 40 - -
Lan11g1815 218 Gene3D - 32 161 - -
Lan11g1815 218 Gene3D - 162 215 - -
Lan11g1815 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 - -
Lan11g1815 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lan11g1815 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Lan11g1815 218 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lan11g1815 218 MobiDBLite consensus disorder prediction 127 167 - -
Lan11g1815 218 MobiDBLite consensus disorder prediction 11 26 - -
Lan11g1815 218 CDD Ribosomal_S8e_like 5 197 - -
Lan11g1815 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1815 Lan-Chr11 34800999 34803430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1815 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.010 2.98e-125 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1815 K02995 - gmx:100794937 368.622