Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1809 ATGGCTGCCAATTTCTGGTCATCATCTCACTACAAGAACCTTCTGGATCAAGAAGATGTTGATATGGTGAACCCACTTGACAAAGAAAAGGGTGTCACCCTTGAGGATTTTAAGCTCATTAAGTTTCACATGGCTAATTATATTTTGAAATTGGCTCAACAAGTAAAAATTAGGCAGAGGGTTGTTGCCACTGCAATTACATACATGAGGCGTGTTTACACCAGGAAGAGTATGGTTGAATATGATCCACGCCTGGTAGCTCCAAGCTGCTTGTACCTGGCATCAAAATCTGAAGAAAGTACACTGCAGGCCCGGTTACTTGTATTTTACATTAAAAAACTATATGCTGATGATAAGTATAGGTGTGAAATCAAGGACATACTTGAAATGGAAATGAAGATCTTAGAAGCGCTTAACTTTTACTTGGTTGTATTCCACCCATACCGTTCACTATCTCAGTTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAAGTAACTTGGGGGATTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCACCACATCTGATTGCTTTAGCTTGCATATACATTGCTAGTGTACTCAGGGAGAAAGACACCACTGTTTGGTTTGAAGAACTTCACGTTGATATGAACGTGGTTAAAAATATATCAATGGAGATACTTGATTTTTATGAAAACAATAGAATGTTCACTGAAGATAGAGTCAATGCTGCTCTGCAGAAGCTAGCCTTGAGGCCCTAA 762 0.3911 MAANFWSSSHYKNLLDQEDVDMVNPLDKEKGVTLEDFKLIKFHMANYILKLAQQVKIRQRVVATAITYMRRVYTRKSMVEYDPRLVAPSCLYLASKSEESTLQARLLVFYIKKLYADDKYRCEIKDILEMEMKILEALNFYLVVFHPYRSLSQLLQDAGLNDLNMTQVTWGIVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTVWFEELHVDMNVVKNISMEILDFYENNRMFTEDRVNAALQKLALRP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1809 253 Gene3D - 19 143 - -
Lan11g1809 253 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 248 - -
Lan11g1809 253 Coils Coil 228 248 - -
Lan11g1809 253 SUPERFAMILY Cyclin-like 146 239 IPR036915 -
Lan11g1809 253 CDD CYCLIN 46 135 IPR013763 -
Lan11g1809 253 PIRSF Cyclin_C_H_G 1 253 - -
Lan11g1809 253 Pfam Cyclin, N-terminal domain 44 142 IPR006671 -
Lan11g1809 253 PANTHER CYCLIN 4 248 IPR043198 GO:0006357|GO:0016538
Lan11g1809 253 SMART cyclin_7 46 136 IPR013763 -
Lan11g1809 253 SMART cyclin_7 149 229 IPR013763 -
Lan11g1809 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Lan11g1809 253 Gene3D - 8 239 - -
Lan11g1809 253 CDD CYCLIN 146 213 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1809 Lan-Chr11 34761519 34771380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1809 60 199 Core Cell Cycle Gene Families AT5G27620 28.000 4.51e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1809 K15161 - gmx:100784345 468.388