Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1800 ATGAGTAAGTTTGAACTAGTTGAAAAGGTTGTAATTGTTCCTGAGAAACCAACACCCTATAAGAGAATATTCTTGTCAAATATTGACCTGACCCTTGTTGTTTACCAAGATTCTGCTTCCTTTTTTGATCCTCCAAGTTGTGAAATGAGCTTCTATGAGATTTATAGCAAATTATTCAGTGCACTTAGTAAAATGCTTGTGCATTACGGCTTTATGGCTGGCCGATTAGTGCCAAGTTCGGAGGATAATCTTCGGTTTGAAATAGACTGTAACGATGCGGGTATTGTGGTTGCTGCTGCAAGAACTGATAGAAAGCTGAGTGAATTTGGTGTGATTTCTGCGCCGAATCCGGAGTTAAGGGAATTGATTGTTTTCTTGGTTGATGAGGGTGAAGAAGAAACTGAACTGAAAGACAAGCCTCTTGCATCTTTACAGCTTACACAGTTTGGCTGTGGAAGTTTGGCACTTGCGTCTCATTACAACCATTGCATACTAGACGGTCTAGCAGTAAGAGATTTTGAGGCAAATTTGGCTGCATTAACATGCGGCGATGATTTCATCATCATACCTAATCCAAATAGGATACCGCTAAGATCTCGGATCCCTCCAAAGATAAGTCATCCACATTATGAGTATTCAAAGTCTACTGACATAGTTAACTTGTTTACGGTTCGCGGCACGAGTGGAACCAATGCTAGACACTCGATGACAGAAAACCAAGTTCACGTGCTTCATTTATCAATGCAAAACATTGCCAGCTTAAAAAAGAAAGCTTTGAAAGACAGCAACTTAAAGAATAGCACCACTTTTCATGTTGTTGCAGCGAAAATATGGAAGGCGAGAAGCATCGCAACAAAGATGCCAGAGGATAAGGTATCCACAATGCTGTTTCCTGTCGATGCAAGGAAAAGGGTTGTTCCCGAACTTCCAGACGGCTTCGCAGGGAATGCATTGGTTCCCGGCTATGCAAGAGCAACTGTGAGGGAGCTTATGGAATTGGAAGATGCTTATCACATACGAAAAGTGCAAGAAGGTATCGAAAGACTCAATGACGAGTACATTAAGTCGGGTATAGATTGGTTGGAAGTGAACAAAGGGGTGCCTTGCCGGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGGTTGGGGCTAGAGGAGCAACATTTTGCATGGGGTAGACTAAAATGTGCAACTCCACTTGCAGTTAAGCCGGGTTTGGTTATCTTATTGCCCGGACCACAAGATCAAGGAGGTCTTAGTATATGTCTGGATTTACCTGATGATCAAATGCAAGAGTTTTCTAGGATAATGCTAGAAGTTTAG 1323 0.4225 MSKFELVEKVVIVPEKPTPYKRIFLSNIDLTLVVYQDSASFFDPPSCEMSFYEIYSKLFSALSKMLVHYGFMAGRLVPSSEDNLRFEIDCNDAGIVVAAARTDRKLSEFGVISAPNPELRELIVFLVDEGEEETELKDKPLASLQLTQFGCGSLALASHYNHCILDGLAVRDFEANLAALTCGDDFIIIPNPNRIPLRSRIPPKISHPHYEYSKSTDIVNLFTVRGTSGTNARHSMTENQVHVLHLSMQNIASLKKKALKDSNLKNSTTFHVVAAKIWKARSIATKMPEDKVSTMLFPVDARKRVVPELPDGFAGNALVPGYARATVRELMELEDAYHIRKVQEGIERLNDEYIKSGIDWLEVNKGVPCREDSFSLVAWWRLGLEEQHFAWGRLKCATPLAVKPGLVILLPGPQDQGGLSICLDLPDDQMQEFSRIMLEV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1800 440 Pfam Transferase family 4 434 - -
Lan11g1800 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 438 - -
Lan11g1800 440 Gene3D - 2 214 IPR023213 -
Lan11g1800 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 438 - -
Lan11g1800 440 Gene3D - 227 440 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1800 Lan-Chr11 34671163 34672750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1800 3 440 Monolignol Biosynthesis Gene Families AT5G48930 27.232 2.30e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1800 K15400 - gmx:100801822 692.575