Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1789 ATGTCTCTTCCAAGAACCATAGAAGTTAAACCAAATAGCAATACCCTTCAGAAGCTTATGAAGGAAGGAGCACCCTCTTCCTCTTCTTCTTCATGGAATAGGCCCAACAACAAAAGAACCAATATTCATGATGATAGTGATGAAGATATGTTCACGGTTCCAGATGTGGAAGCTACACAAAGTGTTCAAAATAGTAAGGACAATGAGAGTGTGAATGAGCCTCAGCTTCAAACTAGCTTCCATGGAAAACGCAGCCATGGAAGAAACCCTGCAGATAAGGAGTATAGACGCCTTAAAAGGTTATTGAGGAACAGAGTTTCTGCTCAACAGGCCCGTGAAAGAAAGAAGGTATATGTAAATGATTTGGAATCAAGAGCTCAAGAGTTGGAAGACAAGAATTCCAAGTTAGAAGAGTCTATATCAACTTTGATCAATGAGAACACCATGCTCCGTAAGGTGCTTATGAATACAAGGCCTAAAGTTGATGAGAGCAATGATGCTTAG 504 0.4028 MSLPRTIEVKPNSNTLQKLMKEGAPSSSSSSWNRPNNKRTNIHDDSDEDMFTVPDVEATQSVQNSKDNESVNEPQLQTSFHGKRSHGRNPADKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAQELEDKNSKLEESISTLINENTMLRKVLMNTRPKVDESNDA* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1789 167 Coils Coil 112 146 - -
Lan11g1789 167 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 99 114 IPR004827 GO:0003700|GO:0006355
Lan11g1789 167 CDD bZIP_HY5-like 106 147 - -
Lan11g1789 167 MobiDBLite consensus disorder prediction 56 84 - -
Lan11g1789 167 MobiDBLite consensus disorder prediction 1 37 - -
Lan11g1789 167 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 16 166 - -
Lan11g1789 167 SUPERFAMILY Leucine zipper domain 95 155 IPR046347 GO:0003700|GO:0006355
Lan11g1789 167 Gene3D Single helix bin 115 156 - -
Lan11g1789 167 SMART brlzneu 92 156 IPR004827 GO:0003700|GO:0006355
Lan11g1789 167 MobiDBLite consensus disorder prediction 1 96 - -
Lan11g1789 167 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 16 166 IPR044280 GO:0000981|GO:0045944
Lan11g1789 167 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 94 157 IPR004827 GO:0003700|GO:0006355
Lan11g1789 167 Pfam bZIP transcription factor 93 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1789 Lan-Chr11 34565582 34569569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1789 58 163 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 64.545 2.48e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan11g1789 bZIP_1 1.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1789 K16241 - gmx:100783826 194.512