Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1771 ATGTCTGGGCACAGAAGCTCAAGAGATTCATTGTGCACAGATGAGAATGAGATTAATGATCTTGTGTCAAGGTTACAAGTACTGTTGCCTCAACTTAACCAAAGAAACGGCTTAAGGCAACCAGTATCTAAGATTTTGCAGGAAACATGCTGTCACATTAAGAATTTGCAGAAAGAAGTAGAAGAACTCAGTGAAAAGCTAACAAAGCTAATGGATTCTATTGATATTAGTGATATAGACAGAAGAGCTATAGAAGATTTTCTCCAACTATAA 273 0.3626 MSGHRSSRDSLCTDENEINDLVSRLQVLLPQLNQRNGLRQPVSKILQETCCHIKNLQKEVEELSEKLTKLMDSIDISDIDRRAIEDFLQL* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1771 90 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 70 IPR036638 GO:0046983
Lan11g1771 90 PANTHER DNA BINDING PROTEIN 1 89 - -
Lan11g1771 90 Coils Coil 46 73 - -
Lan11g1771 90 Gene3D - 15 83 IPR036638 GO:0046983
Lan11g1771 90 PANTHER DNA BINDING PROTEIN 1 89 IPR044172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1771 Lan-Chr11 34412915 34414200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1771 2 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 50.000 2.76e-16 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan11g1771 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1771 - - rcu:112536377 85.5001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1293 7 17883752 17884540 Lan11g1771 11 34412915 34414200 LSH