Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1757 ATGAAGGATAGTGTGGCTGAGATGAAATCAGAGGAGCGTTGTCAGGAGAATAAGCAATCTACTGCTGCTTCTTGCTCTTCGATATCTGAAGGCTGTGGCAGTGCAATTCGCAAGTCTACAACGATACGTAGTCCGGCACTAACGTCTCCTTCACATCGGAGGACCACCGGCCCTATAAGGCGCGCAAAGGGAGGTTGGACAGCAGAGGAGGATGAGACATTAAGGAATGCTGTTGCAGCTTTTAAAGGAAAGAGTTGGAAGAAAATAGCTGAGTATTTTCCTGATAGATCAGAAGTTCAGTGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACACAAGAGGAGGATGATAAAATTGTTGAGCTGGTGTCAGAACATGGGCCAACAAAATGGTCTTTGATAGCCAAGTCTTTACCTGGTCGAATAGGGAAACAGTGCCGAGAACGGTGGCACAATCATCTCAATCCCGACATAAAAAAGGACGCATGGACTATGGAAGAGGAAATGACCTTGATGAATGCTCACAGTATACATGGGAATAAATGGGCTGAAATAGCCAAGGTCCTTCCTGGAAGGACTGACAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATACAGCTACGGGAAGACTTCCTCCAATTTCAAAGAACAATACACAAATTGCTGGCAAAGATTCAATTAGACAATCTGTTAATAAAACACAACTTGTTTCTTCAAACAAAGAATTAAATGCAGCTGTTGAAACATCTTCTGAAACTACCGCCATTAGTAAGCTAGATGACAGTAGCAAGAATTCCTCAGGAACAGTAAGAGTTGGTTATTCTTCAAGTGTTCCAGTAAATGAATCTGCGGATTCTGACTCTGTAGAATGCAATCCCGGATCATCCAACGTAGATCTCAGCTGTAGCTACTCAGAGCCGGTGTCCAGAGCTAATTGTGGAATAACTAGTGGGCCAAAAATTGAGAATTATAGCCTCAATAGAAAGGCAACTATTGAGCATTGTATAAACAATGGTGAAATGAGCAGTAGCAGGTTAATCATAACATCATTTCCGCAAGAAAGTCCATCATGTGGTTCTTTGTGTTATGAACCGCCATACCTAGATGGTTCAGTTCCTTTAGATTCTCTTGATCTAAATTACACATGCCGGCATAATGAGTCCGTGTTGTCACCTATTGGTTTCCGTACTCCAACTAGTATGAAGAGTCGGGAATGCAGAGAGTCACCGGAATCAATATTGAGAAAGGCTGCCAGTACTTATCCAAATACTCCCTCCATATTGAGGAGGAGAAAGACTGAAGTCCAAACACACACCTCTCCTACTAAAATTTTGAAACTAGATAATGGTTTGCATGCTTCTAATGAACCTGCAAGAGACAAGGATGATTCTGGTTCTGAAGTTGGCATTTGCTCCGAGAGTCCAGCAATAGTTGTCAATGAGAGTGACGGTCTCAGCAATACGGCGTTCAATGCGTCTCCACCATACCAGCTGAGATTCAAGCGAAAAGCGGTTATCAAGTGTGTGGAAAAACAACTTGAGTTTGCTTTTGACGAAGAGAAGAACGATGACAACGATATCGCAATGGAAAAATCTGTGAAGAGGAACAATGTGATATCTGAAGATTGTCTGCATGAAACAAATTTGGTAGTGACATAG 1701 0.4192 MKDSVAEMKSEERCQENKQSTAASCSSISEGCGSAIRKSTTIRSPALTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVAAFKGKSWKKIAEYFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSEHGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTMEEEMTLMNAHSIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYTATGRLPPISKNNTQIAGKDSIRQSVNKTQLVSSNKELNAAVETSSETTAISKLDDSSKNSSGTVRVGYSSSVPVNESADSDSVECNPGSSNVDLSCSYSEPVSRANCGITSGPKIENYSLNRKATIEHCINNGEMSSSRLIITSFPQESPSCGSLCYEPPYLDGSVPLDSLDLNYTCRHNESVLSPIGFRTPTSMKSRECRESPESILRKAASTYPNTPSILRRRKTEVQTHTSPTKILKLDNGLHASNEPARDKDDSGSEVGICSESPAIVVNESDGLSNTAFNASPPYQLRFKRKAVIKCVEKQLEFAFDEEKNDDNDIAMEKSVKRNNVISEDCLHETNLVVT* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1757 566 ProSiteProfiles Myb-like domain profile. 58 109 IPR001005 -
Lan11g1757 566 PANTHER MYB PROTEIN-RELATED 27 479 - -
Lan11g1757 566 Pfam Myb-like DNA-binding domain 115 161 IPR001005 -
Lan11g1757 566 Pfam Myb-like DNA-binding domain 63 109 IPR001005 -
Lan11g1757 566 Pfam Myb-like DNA-binding domain 167 210 IPR001005 -
Lan11g1757 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 165 IPR017930 -
Lan11g1757 566 MobiDBLite consensus disorder prediction 39 55 - -
Lan11g1757 566 SMART sant 166 214 IPR001005 -
Lan11g1757 566 SMART sant 114 163 IPR001005 -
Lan11g1757 566 SMART sant 62 111 IPR001005 -
Lan11g1757 566 ProSiteProfiles Myb-like domain profile. 110 161 IPR001005 -
Lan11g1757 566 PANTHER MYB-RELATED PROTEIN B-LIKE 27 479 - -
Lan11g1757 566 MobiDBLite consensus disorder prediction 1 26 - -
Lan11g1757 566 SUPERFAMILY Homeodomain-like 64 119 IPR009057 -
Lan11g1757 566 CDD SANT 66 109 IPR001005 -
Lan11g1757 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 216 IPR017930 -
Lan11g1757 566 SUPERFAMILY Homeodomain-like 112 208 IPR009057 -
Lan11g1757 566 Gene3D - 62 114 - -
Lan11g1757 566 MobiDBLite consensus disorder prediction 467 481 - -
Lan11g1757 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 109 IPR017930 -
Lan11g1757 566 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Lan11g1757 566 MobiDBLite consensus disorder prediction 1 16 - -
Lan11g1757 566 CDD SANT 117 161 IPR001005 -
Lan11g1757 566 MobiDBLite consensus disorder prediction 39 67 - -
Lan11g1757 566 MobiDBLite consensus disorder prediction 438 482 - -
Lan11g1757 566 MobiDBLite consensus disorder prediction 262 306 - -
Lan11g1757 566 Gene3D - 168 249 - -
Lan11g1757 566 Gene3D - 115 166 - -
Lan11g1757 566 CDD SANT 169 212 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1757 Lan-Chr11 34173242 34197398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1757 1 547 MYB Transcription Factor Family AT3G09370 46.942 4.79e-145 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan11g1757 Myb_DNA-binding 7.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1757 K09422 - gmx:778081 809.29