Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1756 ATGAAGGATAGGCAACGGTGGCGAGCTGAAGAGGATGCTTTATTATGTGCTTATGTCAAACAATATGGTCCTAGAGAATGGAATCTTGTGTCTCAGCGCATGAACACGCCTCTTAATAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAATTACCTCAAGCCTGGTATTAAGAAAGGATCTCTTACCGAGGAAGAGCAGCATCTTGTCATCCATCTTCAAGCAAAACACGGAAACAAATGGAAGAAAATTGCTGCGGAAGTCCCAGGTCGAACTGCTAAGAGGTTAGGGAAGTGGTGGGAAGTATTCAAAGAGAAGCAGCAAAGAGAAACAAAGGTGATTGATAGAACTGTTGACCCGATAAACGATAGCAAGTACGAGCACATACTAGAGAGTTTTGCGGAGAAACTAGTGAACGAGCGCCCTTCGCCATCGTATGTTATGGCTTCTTCTAATGGTTCTTTTATACATACCGATGCAGCAGTGACTGCACCAGCAATGCTTCCTTCTTGGCTTTCGATCTCCAATTCTAATAACACTGCACCTGTTAGGCCACCTTCACCGTCCGTGACACTAAGTCTTTCTCCCTCAGTAGTGGCTGCACCTCCTCCGTGGATGCAAACCGTAAGAGGGCCGGACAATGGTCCTCTTGTTATGGGCAACGTAACACCTCACGGGTCTGTTTTAGCAGCATATGGTGATAACATGCTTATGTCTGAGTTAGTGGAGTGTTCTAAAGAGTTGGAGGAAGTGCATCATGCTTTGGCAGCACATAAGAAGGAAACAGCATGGCGGTTAAGCCGAGTCGAGTTGCAGCTGGACTCAGAGAAGGCGAGTCGAAGGAGGGAGAAAATGGAAGAAATAGAAGCAAAGATTAAAGCTCTTCGGGACGAGCAGGCGGCTGCTTTGGACAGAATTGAAATGGAATACAGGGAACAATTGGCAGTGTTGAGAAGAGATGCAGAAACCAAGGAACAGAAATTGACCGAGCAATGGGCTGCGAAGCACTCGCGACTTACGAAGTTTCTAGAGCAGGTAGGATGCAGGTCAAGGCTTGCTGAGCCAAATGGAAGATAG 1077 0.467 MKDRQRWRAEEDALLCAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRETKVIDRTVDPINDSKYEHILESFAEKLVNERPSPSYVMASSNGSFIHTDAAVTAPAMLPSWLSISNSNNTAPVRPPSPSVTLSLSPSVVAAPPPWMQTVRGPDNGPLVMGNVTPHGSVLAAYGDNMLMSELVECSKELEEVHHALAAHKKETAWRLSRVELQLDSEKASRRREKMEEIEAKIKALRDEQAAALDRIEMEYREQLAVLRRDAETKEQKLTEQWAAKHSRLTKFLEQVGCRSRLAEPNGR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1756 358 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Lan11g1756 358 CDD SANT 6 53 IPR001005 -
Lan11g1756 358 Gene3D - 4 58 - -
Lan11g1756 358 Gene3D - 62 125 - -
Lan11g1756 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Lan11g1756 358 SMART sant 58 106 IPR001005 -
Lan11g1756 358 SMART sant 3 55 IPR001005 -
Lan11g1756 358 Coils Coil 307 331 - -
Lan11g1756 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Lan11g1756 358 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 358 - -
Lan11g1756 358 CDD SANT 63 104 IPR001005 -
Lan11g1756 358 Pfam Myb-like DNA-binding domain 7 68 - -
Lan11g1756 358 PANTHER TRANSCRIPTION FACTOR AS1 1 358 IPR031055 GO:0005634|GO:0006351|GO:0010338
Lan11g1756 358 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Lan11g1756 358 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Lan11g1756 358 Coils Coil 268 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1756 Lan-Chr11 34166860 34170107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1756 1 349 MYB Transcription Factor Family AT2G37630 64.130 7.20e-154 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan11g1756 Myb_DNA-bind_6 7.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1756 K09422 - gmx:100819082 570.852