Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1755 ATGGGGGTGATTTCTTTTATGGGTGCTTGTTGGAGCAATAAAATTAAAGCTGTGAGTCCTTCCAATACAGGCTTCACATCTAGAAGTGCAAGCAGGAGTGGCTATGACACCAGCTCAAATAGCCGGAATTCATCAGCCTCCATACCTGCCATTCCTCGAAGTGAGGGTGAGATCTTGCAATCTTCCAATCTGAAAAGCTTCAGCTACAGTGATGTAAGAGCTGCCACAAGAAATTTCCGCCCCGACAGTGTCTTGGGGGAGGGTGGTTTTGGTTCAGTTTTCAAGGGCTGGATCGATGAGCAATCACTTGCTGCTACCAAACCAGGAACAGGCATGATTATCGCTGTTAAGAGACTTAACCAAGACGGTTTCCAGGGTCATAAGGAATGGTTGGCTGAAATCAACTATCTCGGGCAACTACAACATCCTAATCTGGTTAAATTGATAGGATATTGCTTTGAGGATGAGCATCGGCTTCTGGTTTATGAGTTTATGCCTAAGGGTAGCGTGGAGAACCATCTATTCAGAAGAGGTTCATTTTTTCAGCCACTCTCTTGGAGTTTGCGGTTGCAAATAGCCCTAGGGGCTGCAAGGGGTCTTGCTTTTCTCCACAGTACAGAACCTAAAGTCATATATCGTGACTTCAAGACTTCAAATATCCTGCTGGATACCAAATATAATGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGGCCAACTGGTGACAAAAGCCATGTCTCTACTAGGGTCATTGGAACCCGGGGATATGCTGCACCCGAGTATCTAGCAACAGGTCATCTCACTACAAAGAGTGATGTGTATAGCTTTGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCGATAGACAAGAACCAGCCACCTGGAGAACATAACTTAGTTGAATGGGCCAAACCATACCTATCTAATAAACGTAGAGTTTTTCGTGTAATGGATCCTCGTCTCGAAGGTCAGTATTCCAATAATCGGGCACAAGCGGCAGCCACCCTTGCTTTACAATGTCTTGCTAGTGAGCCTAAATGCAGGCCTAGTATGGACGAGGTGGTAAAGGCATTGGAACAACTTGAGGACACCCAGAAGAAAAGTGCTGATAAGAAAGAGCATCATCGTGTGCGTGGTTCTGGCCTCGGCAATTCCAATGGCCACCACCCTGCATCCAGCAAAGGTAGTGCCGATGCTCCCAGAAAGGCTTCTGCGTATCCCAGGCCTTCCGCATCTCTTCTTCACGCTTGA 1260 0.4651 MGVISFMGACWSNKIKAVSPSNTGFTSRSASRSGYDTSSNSRNSSASIPAIPRSEGEILQSSNLKSFSYSDVRAATRNFRPDSVLGEGGFGSVFKGWIDEQSLAATKPGTGMIIAVKRLNQDGFQGHKEWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSVENHLFRRGSFFQPLSWSLRLQIALGAARGLAFLHSTEPKVIYRDFKTSNILLDTKYNAKLSDFGLARDGPTGDKSHVSTRVIGTRGYAAPEYLATGHLTTKSDVYSFGVVLLEMISGRRAIDKNQPPGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSNNRAQAAATLALQCLASEPKCRPSMDEVVKALEQLEDTQKKSADKKEHHRVRGSGLGNSNGHHPASSKGSADAPRKASAYPRPSASLLHA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1755 419 ProSiteProfiles Protein kinase domain profile. 79 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1755 419 Gene3D Phosphorylase Kinase; domain 1 54 164 - -
Lan11g1755 419 MobiDBLite consensus disorder prediction 367 382 - -
Lan11g1755 419 SUPERFAMILY Protein kinase-like (PK-like) 48 361 IPR011009 -
Lan11g1755 419 ProSitePatterns Protein kinases ATP-binding region signature. 85 117 IPR017441 GO:0005524
Lan11g1755 419 Pfam Protein kinase domain 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1755 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lan11g1755 419 PANTHER KINASE 1B 27 399 - -
Lan11g1755 419 MobiDBLite consensus disorder prediction 18 52 - -
Lan11g1755 419 PANTHER OS01G0588500 PROTEIN-RELATED 27 399 - -
Lan11g1755 419 CDD STKc_IRAK 85 364 - -
Lan11g1755 419 Gene3D Transferase(Phosphotransferase) domain 1 165 386 - -
Lan11g1755 419 MobiDBLite consensus disorder prediction 367 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1755 Lan-Chr11 34154036 34157435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1755 57 361 Glycoside Hydrolase AT3G07070 51.307 6.51e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan11g1755 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1755 - - gmx:100819620 684.871