Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1748 ATGGATGAGCAAGGTCAATATAGGGTGTCCACAAAGAGAAAGTACTCAATGAGTTCCTCTAACCTAACTTCTTCAGAAACTAATTACCCTTCTTCCTATGATGAATCATCATGGGAAGAAAAAGCTTTTGCAAAAGATGCATCTGGGTTTGGTTGCATATGGCCACCAAGATCATATTCTTGTAGCTTTTGCAGAAGAGAGTTCAGGTCAGCACAGGCTCTAGGTGGCCACATGAATGTTCATAGAAGGGATAGAGCAAGACTAAATCAGCACCAACCAACTAGTCCCCAACTAAATGAAACTCTGAATATTGTTCAAAATCCTTTAAACTCAGGTTACCTATATCCATCTTCTCTTTGTGGATTGGCCAATACCAACAACAACACTAACCCTAATTATTCTGATCCTCATCATGTTATTGCTTCATCTTCTATGGTTTTAACCCCATCAGTTAATAAGGATTTTATAGAGGAAACCCATAATATTCCAATTTATAGTTCCTCTATTTTCCATAAGTCTTCTAACCTTTCATCTAAATCATTCTCAAATCTAGCTGAATCTGGTGCTGAGAGAATCTCTAAGGGATTGAAGAATGACCATAAAACTGATGTGGCTGTGAGCATGAACCTGAACTTGTATGTGTGTAGAGCTTACACACCTGTGCAGTTTGAGACTGAAGAGGAAGATTTAATCAGTTTCAAGAAGAGGAAAATGGATGCATCAATTCCATTCTTCCCAAAACAAAGCTCAGTTGATACAAATCATATGCAGTCACAGATGTTTGAATTTAGCCCTAGCTCCATTGAAGAGGTGGATCTGGAGCTAAGGCTTGGTTACAGGCCAAAGGTATAG 852 0.3873 MDEQGQYRVSTKRKYSMSSSNLTSSETNYPSSYDESSWEEKAFAKDASGFGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLNQHQPTSPQLNETLNIVQNPLNSGYLYPSSLCGLANTNNNTNPNYSDPHHVIASSSMVLTPSVNKDFIEETHNIPIYSSSIFHKSSNLSSKSFSNLAESGAERISKGLKNDHKTDVAVSMNLNLYVCRAYTPVQFETEEEDLISFKKRKMDASIPFFPKQSSVDTNHMQSQMFEFSPSSIEEVDLELRLGYRPKV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1748 283 MobiDBLite consensus disorder prediction 10 31 - -
Lan11g1748 283 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Lan11g1748 283 Gene3D Classic Zinc Finger 56 109 - -
Lan11g1748 283 MobiDBLite consensus disorder prediction 1 31 - -
Lan11g1748 283 Pfam C2H2-type zinc finger 59 83 - -
Lan11g1748 283 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 3 283 - -
Lan11g1748 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Lan11g1748 283 PANTHER OS07G0101800 PROTEIN 3 283 - -
Lan11g1748 283 SUPERFAMILY beta-beta-alpha zinc fingers 56 86 IPR036236 -
Lan11g1748 283 SMART c2h2final6 59 81 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1748 Lan-Chr11 34061302 34062241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1748 35 90 C2H2 Transcription Factor Family AT2G37740 80.357 1.72e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan11g1748 zf-C2H2_6 1.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1748 - - gmx:100814816 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1748 11 34061302 34062241 Lan13g1106 13 16498189 16499609 LSH