Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1735 ATGGCTGATGAGGGTTTTGAACCCTACCATGTTCCCCAACAAAGCAGAAGAGAAAAGCTTAGAGTTCTAGCTCAGAACCAACCTACCCTTGTTGCTGAATCTACTTCTTTATTCCCTCTCTACGATCCTTCACCTATTCCCTCAGATTTGTTAACTTGTCCTAGCCAACAAGGTCCCATGATGTTTCATAGTAATAACCACAACAACCATGTTCCATTTTCTAAAGAAAACCAAGGTTGTAGTAGTGGCATGAAGGGAGAAGGTTCCAATTTTGTGACCGTGTTTTCAAGGGCTGTGAACCCTTCTACTTGTTCTTCTTCATCTTCATACTTGGATCCTTCAATTCAAGTTATCAACCACAACCCTTTTCTTTATAATAACCAACCTCAAAGCTTTCAAAACCTTAGCAGCAGTGAAATGATTGTGTTTAAGCCTGAACCATTGTCTTTGTCTCTCTCATCTAACAACAACAACAATAATACTCATTACCCATATGGCTGTGCCTCTAATGAAGTTTTTTCAAGGAACACAGTTCCACTTGGACCATTTACTGGTTATGCTATGATATTGAAGGGATCTAGGTTCTTGAAGCCTGCACAGCAATTATTGGAGGAGGTATGTGATGTTGGGGTTCGTGGAATTTACACAGAGAAGATCACTACTGATGTTGATACAACTTTGATGGAACCTCCTCCTATGGAGAGTTTAAGTACTGGTGGAATAGTTGGTGTGGATGATGATGCAATTGGGGATGGAAATGAAAGTAGGAAGAAGAAGCCAAGGTTATTAACCATACTTGATGAGGTCTACAGGAGGTACAAGCAGTATTATCAACAGATGCAAGCAATCGTAACTTCATTTGAATATGTGTCTGGTCTCGGTAATGCAGCGCCATATGCAAGTTTGGCTATAAATGCCATGTCTAAACATTTTAGATGCTTGAAGAATATGATAACTGAACAACTCCAGTTTCTCAATAAGACTCAGTTTCAAGTAAGCAATAACAGGAAGGATGAATCTCCAAGGTTTCGAAACACCAATGATAGAGGAGGCCCTTACAGCCAAAGACAGCCTGGGTTTCTTGAGCAACAACAACCTGTTTGGCGACCTCAGAGAGGACTCCCCGAGCGTGCTGTTAGTGTTCTTAGGGCATGGTTGTATGATCACTTTCTTCACCCTTATCCCACTGATACCGACAAGTTAATGTTGGCTAAACAAACTGGTTTATCTCGTAGCCAGGTTTCTAATTGGTTTATTAATGCTAGAGTAAGGCTTTGGAAACCAATGGTGGAAGAAATACACATGCTAGAATCACAGCAACAAGCTCAAAATAAATCACAAAGAGATGAACATAGTAGGAACAAGTTGATTCATAATCATGGTTCACTTGTTACTCATGAGAATCCATCTAGCTCCACTAACAGAAATGACTTTCTTAACACAAGCAACCAGCAACTGGGTATGCATGGTAGTGTTAATGGTGCAAGCAATGGTAATGGTGTAAGCAATGGTAATGGTGTCTCACTTACACTTGGTCTTCATCAAAATCACGGGATTGGATTATCTGAACCCTTTCCTATGAATGCAGCTCAACGTTTTGGTCTTGCCCTTGATCATGAAGGTTGTGTTATAAGCGGTTTTGAATCACAAAATCGGCATTTTGGAAGAGATGTTATTGGAGGGCAACTTTTGCATGACTTTGTAGGCTGA 1710 0.4047 MADEGFEPYHVPQQSRREKLRVLAQNQPTLVAESTSLFPLYDPSPIPSDLLTCPSQQGPMMFHSNNHNNHVPFSKENQGCSSGMKGEGSNFVTVFSRAVNPSTCSSSSSYLDPSIQVINHNPFLYNNQPQSFQNLSSSEMIVFKPEPLSLSLSSNNNNNNTHYPYGCASNEVFSRNTVPLGPFTGYAMILKGSRFLKPAQQLLEEVCDVGVRGIYTEKITTDVDTTLMEPPPMESLSTGGIVGVDDDAIGDGNESRKKKPRLLTILDEVYRRYKQYYQQMQAIVTSFEYVSGLGNAAPYASLAINAMSKHFRCLKNMITEQLQFLNKTQFQVSNNRKDESPRFRNTNDRGGPYSQRQPGFLEQQQPVWRPQRGLPERAVSVLRAWLYDHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLESQQQAQNKSQRDEHSRNKLIHNHGSLVTHENPSSSTNRNDFLNTSNQQLGMHGSVNGASNGNGVSNGNGVSLTLGLHQNHGIGLSEPFPMNAAQRFGLALDHEGCVISGFESQNRHFGRDVIGGQLLHDFVG* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1735 569 Pfam Associated with HOX 189 319 IPR006563 -
Lan11g1735 569 Pfam Homeobox KN domain 385 424 IPR008422 GO:0003677|GO:0006355
Lan11g1735 569 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 17 546 - -
Lan11g1735 569 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 17 546 - -
Lan11g1735 569 SMART prehox3 184 320 IPR006563 -
Lan11g1735 569 Gene3D - 371 433 - -
Lan11g1735 569 SMART HOX_1 368 432 IPR001356 GO:0003677
Lan11g1735 569 SUPERFAMILY Homeodomain-like 370 435 IPR009057 -
Lan11g1735 569 CDD homeodomain 368 429 IPR001356 GO:0003677
Lan11g1735 569 ProSiteProfiles 'Homeobox' domain profile. 365 428 IPR001356 GO:0003677
Lan11g1735 569 MobiDBLite consensus disorder prediction 459 501 - -
Lan11g1735 569 MobiDBLite consensus disorder prediction 335 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1735 Lan-Chr11 33797185 33803803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1735 135 569 Homeobox Transcription Factor Family AT5G02030 50.308 1.64e-125 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan11g1735 POX 2.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1735 - - vun:114185080 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1338 7 18486904 18491261 Lan11g1735 11 33797185 33803803 LSH