Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1729 ATGGCTGGAAATAAAGAAGAGGTGAAGCTTTTGGGAATTACGGGAAGTCCATTTGTTTGTAGGGTTATCATTGCTCTTAAGCTGAAAGGAGTTGAATATGAATTCCTAGAAGAAAATTTGGGAAATAAAAGTGATTTGCTCATTAAATACAACCCCATTTACAAGAAGATTCCTGTTCTTGTTCATAATGAGAAACCTATATCTGAGTCTCTTGTTATTGTTGAATATATTGATGAGGTTTGGAAAGGTAACCCTATCTTACCTAAAGAACCTTACAATAGAGCCTTAGCACGTTTTTGGTCCAAGTTCATAGATGATAAGTGTGTTAGTAGTGCATCGAAAGCTGTTTTCACCCTTGATGAGAAAGAGCGTGAGAAGAATGTTGAAGAATCAAATGAGGCACTGCAGATTCTTGAGAATGAACTGAAGGACAAGTTCTTTGGTGGTGAAGAATTTGGTTTTGTCGACATAGCTGCTATTTTCATAGCATTTTGGATCCCTATAATTCAAGAAGTTGGAGGGTTACAATTGTTCACAAGTGAGAAATTTCCCAAACTCTACAAGTGGAGCCAAGAATTTCTCAACCAACCACTTATCAAAGAAAACTTGCCTCCTAGAGAACCACTTTTTAACTTCTTCAAAGGTCGCTATGAAAGCCTTGCTGCTTCAAAATAG 675 0.3704 MAGNKEEVKLLGITGSPFVCRVIIALKLKGVEYEFLEENLGNKSDLLIKYNPIYKKIPVLVHNEKPISESLVIVEYIDEVWKGNPILPKEPYNRALARFWSKFIDDKCVSSASKAVFTLDEKEREKNVEESNEALQILENELKDKFFGGEEFGFVDIAAIFIAFWIPIIQEVGGLQLFTSEKFPKLYKWSQEFLNQPLIKENLPPREPLFNFFKGRYESLAASK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1729 224 CDD GST_N_Tau 8 81 - -
Lan11g1729 224 Gene3D - 90 224 - -
Lan11g1729 224 Gene3D Glutaredoxin 1 89 - -
Lan11g1729 224 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Lan11g1729 224 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Lan11g1729 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Lan11g1729 224 Coils Coil 121 145 - -
Lan11g1729 224 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Lan11g1729 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Lan11g1729 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lan11g1729 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Lan11g1729 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Lan11g1729 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Lan11g1729 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lan11g1729 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1729 Lan-Chr11 33744509 33745794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1729 4 223 Glutathione S-transferase Gene Family AT3G09270 52.915 2.89e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1729 K00799 - gmx:100527851 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1346 7 18597236 18603144 Lan11g1729 11 33744509 33745794 LSH