Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1726 ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCACATGCTTAAGAAATGCATAGAGCAATATGGTGAAGGAAAGTGGCATCGAGTTCCTTTATTGGCTGGTCTAAACCGGTGCCGAAAGAGTTGCAGGCTAAGATGGTTGAACTATCTTCGTCCGAACATCAAAAGAGGAAGTTTTGCAGAGGAAGAAGTGGAAATGATTATCGAACTCCACAAATTATTAGGCAACAGATGGTCACTGATTGCAGGAAGGTTACCAGGAAGAACTGCCAATGATGTAAAGAACTATTGGAACTGTCATCTAAGTAAGAAACTGAATGCTATAGAAGCTGAGAACACACAAATGAACAGAAACATTGATGCCATTAGGCCTAATCAACCTAGAAACATAGGTCCAATTGACCAAGAATCTCAACAACAAGAGAGTGCCATTTCATCTTTGACATTTGATGCTGAAGGAGAGAGCCATATTCTTGAACCACAACAAGAAAATATATATTCATGTTTGGATCAACAAGGCATAATTCATGACTTGCCAATGGAATTTCAATATGAAGGAATGATAAGTGGAGTTGGTAGTAGTACTAACCAATGTGATTGGGATGATTTGCTCTTAGATATGGATATGTATAATGATTTTTCTTCTTAG 648 0.3843 MGGVAWTEEEDHMLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGSFAEEEVEMIIELHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNAIEAENTQMNRNIDAIRPNQPRNIGPIDQESQQQESAISSLTFDAEGESHILEPQQENIYSCLDQQGIIHDLPMEFQYEGMISGVGSSTNQCDWDDLLLDMDMYNDFSS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1726 215 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Lan11g1726 215 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Lan11g1726 215 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Lan11g1726 215 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 212 - -
Lan11g1726 215 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Lan11g1726 215 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lan11g1726 215 Gene3D - 4 55 - -
Lan11g1726 215 PANTHER MYB TRANSCRIPTION FACTOR 5 212 - -
Lan11g1726 215 SMART sant 55 103 IPR001005 -
Lan11g1726 215 SMART sant 2 52 IPR001005 -
Lan11g1726 215 Gene3D - 58 124 - -
Lan11g1726 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Lan11g1726 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Lan11g1726 215 MobiDBLite consensus disorder prediction 122 143 - -
Lan11g1726 215 CDD SANT 61 101 IPR001005 -
Lan11g1726 215 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1726 Lan-Chr11 33637073 33638508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1726 5 121 MYB Transcription Factor Family AT1G66370 68.376 2.90e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan11g1726 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1726 K09422 - gmx:100798101 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1726 11 33637073 33638508 Lan13g1112 13 16624050 16625771 LSH