Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1710 ATGGCATTCAAATTTCCAAAGCTTTTTTCTATGAAGCTAGTACCCATTTGGTTGCTTCTCTTAATGTTCTTATTTTGCTTCCTAGTGTCTTCTTCATCTGCAATGCAAAGTGAAGCAAATGCTCTATTGAAATGGAAAGCTAGCCTTGACAATACAAGCCAGACTTTGCTTTCTTCATGGACTAACAATGGCAATAGTCCTTGCAACAATAATTGGGTTGGTATTGAATGTGATGATGAATCCAAATCTGTTTCCTATATAAGTCTTCTAAATATGGGATTAAGAGGTACACTTCAAAGTCTTAACTTTTCATCATTTTTCAATATCCTTAGTATAGATATAAGCAACAACTCATTTTATGGAACTATTCCTACACAAATTGGGTTGCTCTCAAATTTGGACACTCTATCTTTATCCAATAATAATCTCTCTGGTACCATTCCCAAAAGCATTGGTAATCTCTCAAAACTCTCACATCTTGATCTCAGTGTCAATAATCTTGTTGGTACTATTCCACCTGAGATAACACAATTGATTGGTCTTATAGAAGTTGATATTAGCAACAACACTCTCATAGGATCTATCCCTACATCAATAGGAACATTGGCCAATTTATCATTTCTGGGGTTAGGTAACAACGAATTATCTGGTCACATACCTAGTGAAATTGGAAAGCTGGTCAACCTTAGGAATCTATGGCTTGAAGGTAATAATCTTTCAGGTATCATTCCTGATGAATTGGGTATGATGAAAAGTGTCAATGATATTGATTTGTCTGGAAATTTTCTCTCTGGTAGAATACCATCTTCAATAGGAAATTTGAGCAATTTACAACATCTTTCCCTTCATAACAACACTCTTTCTAGTTTTATTCCTAGTGAAGTGGGAAAACTCTATTCTCTTGTCACAATTCATTTGCAATCTAATAATCTTTCTGGGTCAGTTCCACAATCCATAGGTAACTTGGTCAATTTGGAGACCATAATACTTTGGAAAAATAATCTTTCTGGGTCAATCCCTTCCACCATTGGAAACTTGACAAAGCTCAAAAAAATATCATTTTGTTCAAATGAATTATCTGGGCCATTCCCACCCTCAATAGGAAACTTGACCAATCTCATAGATTTGCATTTAGCATATAATCATTTCATAGGACACTTGCCTCCCAACTTATGCCATAGTGGAAAATTGGAAAAGTTAAGTGCTAATGGTAACAATTTTAGAGGTCAAATCCCAAAGAACATAAAAAGTTGTTCTAGTCTTGTAAGGGTCAGGCTTGAACAAAACCACTTGACTGGAAATATCACAGAAGATTTTGGTGAATATCCAAATTTGAATTACATGGATTTAAGTGATAACAATTTTTATGGGCACCTTTCACCAAAGTGGGGCAAATGCTATAGCCTCCAAAGCCTTAAGATCTCCAACAACAATTTATCCGGTTATATACCACCAGAAATAGCCGAGGCTATAAACTTACATGTACTTAACCTATCTTCAAACCACCTAACGGGACAAATCCCAATGGAGCTAGGTAAGTTGACCTTGCTGAATCAACTATCGATAAGCAACAATCATCTTTCAGGAAATGTTCCCATTCAAATAGCATCATTGAATGAACTTCAAACCTTGGAGCTTGCTGCCAATGATTTTAGTGGAGCCATCATAGAACAACTGGGAAATTTGCCCAAGTTATTGCATTTGAATCTGAGTCAAAATAGATTTGTAGGACATATTCCTTTTGAGTTTGGTCGATTCAATTCTCTTCAAAGTCTTGATCTCAGCAAAAATTTGTGGAGTGGAAAAATACCCGCCACACTTGGAGAGTTGAAATACCTAGAAACATTGAATCTCTCACACAATAACCTTTCTGGTGCAATTCCCTCTAGTTTTGATGATATGTTAAGCTTAACATTTGTTGACATATCATACAACCAATTAGAAGGTCCACTTCCAAGTATTCCAGCTTTTCAAAAAGTTTCAATTGAAGCATTGAGAAACAATAAAGGTTTGTGTGGTAATATCTCTGGCCTTAACCCTTGCCCATCATCACATAACAAGCCTCAACATCACAAGAACAACAAAGTCTTACAACTTGTTTTACCCATTACTTTGACCATTCTAACCCTTCTTCTATTGGTGTCCATAGTTTCATATTGTTTTTGCCTAAGTGTAAGTACAAAAGAAAACCAGGTTGTGGAATCACAAACTCAAAATCTCTTTTCAATATGGAGTTATGATGGGAAAATGGTGTATGAGAATATTCTTGAGGCTACAGAAGAGTTTGACAACAAATATCTCATTGGAGTTGGAGGTTGTGGTTATGTTTATAGAGCTGAGTTACCTACAGGTCAAGTTGTTGCTGTGAAAAAACTCCATTCAATACAAAGTGAGGAAACAGTTAATCTCAAAGCTTTCCAAAGAGAGATAGAAGCTTTGACAAAAATCCGGCATCGTAATATTGTGAAACTCTATGGGTTTTGTTCACATTCTCAGCACTCATTTTTGGTTTATGAGTTGATGGAAAGGGGTAGCATTGATATGATTCTTCGCAATGATGCACAAGCTGTTGAATTTGATTGGAATAGAAGGGTGAATGTTGTTAAAGGAGTGGCCAATGCGTTGAGTTATATGCACCATTATTGTTCACCACCTATTGTTCATAGAGATATTTCATCAAAGAATGTTCTTTTAGATGTGGACTATGAGGCTCATGTTTCAGATTTTGGAACTGCTACACTTCTTAATCCTGATTCTTCAAATTGGACCTCATTTGCTGGTACCTTTGGATATGCTGCTCCAGAACTGGCTTATACTATGGAAGTGAGTGAGAAATGTGATGTGTATAGCTTTGGGGTATTTGCCTTGGAAATAATGTTTGGAAAGCATCCTGCAGAAGTTATATTATCTACAATGTTATTATCTTCTGCAAAACTTGTGGCTTCAACAATTGAGAATTTGTTATTGAATGAGAAATTGGATCAACGAATTCCTTATCCCACAAATCAATTTGCCAAGGAAGCAATAACATCTATTCTAAGAATAGGAATTGCATGCTTGAGTGAAAACCCACGTTCTCGACCTACCATGGAACAAGTAGTGAAAGAACTAATGATCTCAAATTGTTCAATGGATGATCAAGTCCACATTATCACAGTTGAAGATGGGTCTTGA 3174 0.3604 MAFKFPKLFSMKLVPIWLLLLMFLFCFLVSSSSAMQSEANALLKWKASLDNTSQTLLSSWTNNGNSPCNNNWVGIECDDESKSVSYISLLNMGLRGTLQSLNFSSFFNILSIDISNNSFYGTIPTQIGLLSNLDTLSLSNNNLSGTIPKSIGNLSKLSHLDLSVNNLVGTIPPEITQLIGLIEVDISNNTLIGSIPTSIGTLANLSFLGLGNNELSGHIPSEIGKLVNLRNLWLEGNNLSGIIPDELGMMKSVNDIDLSGNFLSGRIPSSIGNLSNLQHLSLHNNTLSSFIPSEVGKLYSLVTIHLQSNNLSGSVPQSIGNLVNLETIILWKNNLSGSIPSTIGNLTKLKKISFCSNELSGPFPPSIGNLTNLIDLHLAYNHFIGHLPPNLCHSGKLEKLSANGNNFRGQIPKNIKSCSSLVRVRLEQNHLTGNITEDFGEYPNLNYMDLSDNNFYGHLSPKWGKCYSLQSLKISNNNLSGYIPPEIAEAINLHVLNLSSNHLTGQIPMELGKLTLLNQLSISNNHLSGNVPIQIASLNELQTLELAANDFSGAIIEQLGNLPKLLHLNLSQNRFVGHIPFEFGRFNSLQSLDLSKNLWSGKIPATLGELKYLETLNLSHNNLSGAIPSSFDDMLSLTFVDISYNQLEGPLPSIPAFQKVSIEALRNNKGLCGNISGLNPCPSSHNKPQHHKNNKVLQLVLPITLTILTLLLLVSIVSYCFCLSVSTKENQVVESQTQNLFSIWSYDGKMVYENILEATEEFDNKYLIGVGGCGYVYRAELPTGQVVAVKKLHSIQSEETVNLKAFQREIEALTKIRHRNIVKLYGFCSHSQHSFLVYELMERGSIDMILRNDAQAVEFDWNRRVNVVKGVANALSYMHHYCSPPIVHRDISSKNVLLDVDYEAHVSDFGTATLLNPDSSNWTSFAGTFGYAAPELAYTMEVSEKCDVYSFGVFALEIMFGKHPAEVILSTMLLSSAKLVASTIENLLLNEKLDQRIPYPTNQFAKEAITSILRIGIACLSENPRSRPTMEQVVKELMISNCSMDDQVHIITVEDGS* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1710 1057 SUPERFAMILY L domain-like 240 598 - -
Lan11g1710 1057 SMART LRR_typ_2 202 225 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 610 633 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 274 298 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 130 153 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 370 394 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 562 586 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 154 178 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 226 249 IPR003591 -
Lan11g1710 1057 SMART LRR_typ_2 322 346 IPR003591 -
Lan11g1710 1057 Gene3D Ribonuclease Inhibitor 286 390 IPR032675 -
Lan11g1710 1057 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 159 292 - -
Lan11g1710 1057 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 276 1043 - -
Lan11g1710 1057 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 180 - -
Lan11g1710 1057 Gene3D Ribonuclease Inhibitor 107 285 IPR032675 -
Lan11g1710 1057 Gene3D Ribonuclease Inhibitor 393 690 IPR032675 -
Lan11g1710 1057 Gene3D Ribonuclease Inhibitor 31 106 IPR032675 -
Lan11g1710 1057 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Lan11g1710 1057 ProSitePatterns Tyrosine protein kinases specific active-site signature. 886 898 IPR008266 GO:0004672|GO:0006468
Lan11g1710 1057 Gene3D Transferase(Phosphotransferase) domain 1 841 1053 - -
Lan11g1710 1057 ProSiteProfiles Protein kinase domain profile. 762 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1710 1057 Pfam Protein kinase domain 764 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1710 1057 SUPERFAMILY L domain-like 37 313 - -
Lan11g1710 1057 SUPERFAMILY Protein kinase-like (PK-like) 743 1040 IPR011009 -
Lan11g1710 1057 Pfam Leucine rich repeat 607 647 IPR001611 GO:0005515
Lan11g1710 1057 Pfam Leucine rich repeat 111 167 IPR001611 GO:0005515
Lan11g1710 1057 Gene3D Phosphorylase Kinase; domain 1 723 840 - -
Lan11g1710 1057 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 159 292 - -
Lan11g1710 1057 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 276 1043 - -
Lan11g1710 1057 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 180 - -
Lan11g1710 1057 SMART LRR_sd22_2 346 372 - -
Lan11g1710 1057 SMART LRR_sd22_2 226 247 - -
Lan11g1710 1057 SMART LRR_sd22_2 274 295 - -
Lan11g1710 1057 SMART LRR_sd22_2 130 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1710 Lan-Chr11 33421140 33425105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1710 5 934 Receptor kinase-like Gene Family AT4G08850 45.474 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan11g1710 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1710 - - lang:109325562 1214.13