Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1704 ATGATTAGTAATTGCTTTGGTGCCTTCAATTGGTGTAAAGGGAATGATGGTGTTGATGATCAGCCACAAGAACAAGTGATTGCAACCAGAACATTTAGCTATAACTCATTGAGATCAGCAACTAGAGATTTTCATCCTTCAAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTATACAAGGGGGCTTTAAGGGATGGTACTCAAGTTGCTATTAAGTCTCTTTCTGTGGACTCTAAACAAGGAAGCCATGAATTCATGACAGAGATTAATATGATATCAAATATACATCATCCGAATCTGGTTGAGCTAATTGGATGTTGTGTTGAGGGTAGTCATCGAATATTGGTCTACGAGTTTCTGGAGAACAATAGCCTTGCCAGTTCCTTGCTTGGTTCCCGAAGTAAATATATTCCTCTGGATTGGCCTAAAAGAGCTGCTATATGCCATGGCACAGCTTCTGGTCTTAGGTTTCTTCATGAAGAAGCTCAACCAAACATTGTTCACAGAGATATCAAGGCTAGCAACATACTTCTGGATGGGAACTTTAATCCTAAAATTGGAGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACCCATGTTAGTACTCGCGTTGCAGGCACGGTGGGATATCTTGCACCAGAGTATGCACTTCTAGGACAGCTTACAAAGAAGGCAGATGTATATAGTTTTGGGGTTCTTATGCTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGCAGCATTTGGAGATAATCTCTTGGTTCTTGTGGAATGGGCATGGAAGCTGAAAGAAGAAAAAAGGCTTCTAGACATTGTAGATCCGGAACTAACCGATTACAACGAGATCGAAGTGTATAGGTTCATTCTGGTTGCTCTATTTTGCACCCAAGCAGCTTCTCAGCATAGACCAAGCATGAAGCAAGTATTGCAAATGCTTTCCACAGAAGTTCATATCAATGAGAAAGCATTGACTAAGCCCGGAATATATAGATGGCATTCTTTGAATGAGTCATCATCTTCTTCTCAAGTAAAGAAGCAGAACAAATATGAAAATCCATATGTAACCTCAACCAACTTTAGTGGTACAGATATTGTGACAGAAATGATTCCTAGATGA 1122 0.3966 MISNCFGAFNWCKGNDGVDDQPQEQVIATRTFSYNSLRSATRDFHPSSKIGGGGYGVVYKGALRDGTQVAIKSLSVDSKQGSHEFMTEINMISNIHHPNLVELIGCCVEGSHRILVYEFLENNSLASSLLGSRSKYIPLDWPKRAAICHGTASGLRFLHEEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGDNLLVLVEWAWKLKEEKRLLDIVDPELTDYNEIEVYRFILVALFCTQAASQHRPSMKQVLQMLSTEVHINEKALTKPGIYRWHSLNESSSSSQVKKQNKYENPYVTSTNFSGTDIVTEMIPR* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1704 373 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Lan11g1704 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lan11g1704 373 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Lan11g1704 373 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Lan11g1704 373 SUPERFAMILY Protein kinase-like (PK-like) 25 314 IPR011009 -
Lan11g1704 373 SMART serkin_6 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1704 373 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Lan11g1704 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 360 - -
Lan11g1704 373 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1704 373 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 360 - -
Lan11g1704 373 CDD STKc_IRAK 63 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1704 Lan-Chr11 33350633 33355550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1704 19 350 Receptor kinase-like Gene Family AT1G56120 50.000 1.31e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan11g1704 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1704 - - gmx:100816683 603.208